Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.87■□□□□ 0.45
RORAP35398 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.87■□□□□ 0.45
RORAP35398 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.87■□□□□ 0.45
RORAP35398 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RORAP35398 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.87■□□□□ 0.45
RORAP35398 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RORAP35398 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.87■□□□□ 0.45
RORAP35398 AL121956.5-201ENST00000625261 221 ntBASIC17.87■□□□□ 0.45
RORAP35398 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RORAP35398 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
RORAP35398 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
RORAP35398 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.87■□□□□ 0.45
RORAP35398 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.87■□□□□ 0.45
RORAP35398 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RORAP35398 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RORAP35398 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RORAP35398 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RORAP35398 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
RORAP35398 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
RORAP35398 TEX21P-204ENST00000641479 1693 ntBASIC17.87■□□□□ 0.45
RORAP35398 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RORAP35398 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
RORAP35398 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.86■□□□□ 0.45
RORAP35398 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
RORAP35398 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.86■□□□□ 0.45
RORAP35398 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RORAP35398 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
RORAP35398 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.86■□□□□ 0.45
RORAP35398 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.86■□□□□ 0.45
RORAP35398 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RORAP35398 AL671277.2-201ENST00000458060 996 ntBASIC17.86■□□□□ 0.45
RORAP35398 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.86■□□□□ 0.45
RORAP35398 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.86■□□□□ 0.45
RORAP35398 GCSHP2-201ENST00000560971 527 ntBASIC17.86■□□□□ 0.45
RORAP35398 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RORAP35398 KRT8P3-201ENST00000519669 1449 ntBASIC17.86■□□□□ 0.45
RORAP35398 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RORAP35398 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RORAP35398 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.86■□□□□ 0.45
RORAP35398 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RORAP35398 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RORAP35398 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RORAP35398 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.86■□□□□ 0.45
RORAP35398 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.86■□□□□ 0.45
RORAP35398 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
RORAP35398 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RORAP35398 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.86■□□□□ 0.45
RORAP35398 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RORAP35398 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RORAP35398 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
RORAP35398 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RORAP35398 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.85■□□□□ 0.45
RORAP35398 AL023284.2-201ENST00000405850 579 ntBASIC17.85■□□□□ 0.45
RORAP35398 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RORAP35398 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.85■□□□□ 0.45
RORAP35398 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.85■□□□□ 0.45
RORAP35398 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.85■□□□□ 0.45
RORAP35398 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RORAP35398 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.85■□□□□ 0.45
RORAP35398 FAM86EP-206ENST00000510506 987 ntBASIC17.85■□□□□ 0.45
RORAP35398 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.85■□□□□ 0.45
RORAP35398 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.85■□□□□ 0.45
RORAP35398 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RORAP35398 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
RORAP35398 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.85■□□□□ 0.45
RORAP35398 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RORAP35398 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RORAP35398 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
RORAP35398 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.84■□□□□ 0.45
RORAP35398 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RORAP35398 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RORAP35398 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RORAP35398 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.84■□□□□ 0.45
RORAP35398 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RORAP35398 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RORAP35398 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
RORAP35398 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
RORAP35398 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.84■□□□□ 0.45
RORAP35398 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RORAP35398 STARP1-201ENST00000397973 869 ntBASIC17.84■□□□□ 0.45
RORAP35398 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RORAP35398 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RORAP35398 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RORAP35398 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.84■□□□□ 0.45
RORAP35398 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.84■□□□□ 0.45
RORAP35398 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.84■□□□□ 0.45
RORAP35398 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.84■□□□□ 0.45
RORAP35398 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
RORAP35398 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
RORAP35398 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RORAP35398 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RORAP35398 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RORAP35398 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RORAP35398 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
RORAP35398 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RORAP35398 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RORAP35398 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.84■□□□□ 0.45
RORAP35398 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.84■□□□□ 0.45
RORAP35398 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RORAP35398 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms