Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.33■□□□□ 0.68
SLC6A4P31645 AL031432.5-201ENST00000641059 760 ntBASIC19.33■□□□□ 0.68
SLC6A4P31645 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
SLC6A4P31645 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SLC6A4P31645 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.33■□□□□ 0.68
SLC6A4P31645 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
SLC6A4P31645 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SLC6A4P31645 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SLC6A4P31645 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SLC6A4P31645 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.33■□□□□ 0.68
SLC6A4P31645 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SLC6A4P31645 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC6A4P31645 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.32■□□□□ 0.68
SLC6A4P31645 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.32■□□□□ 0.68
SLC6A4P31645 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SLC6A4P31645 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.32■□□□□ 0.68
SLC6A4P31645 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC6A4P31645 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.32■□□□□ 0.68
SLC6A4P31645 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC6A4P31645 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.32■□□□□ 0.68
SLC6A4P31645 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SLC6A4P31645 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.32■□□□□ 0.68
SLC6A4P31645 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.32■□□□□ 0.68
SLC6A4P31645 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC6A4P31645 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.32■□□□□ 0.68
SLC6A4P31645 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.32■□□□□ 0.68
SLC6A4P31645 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.32■□□□□ 0.68
SLC6A4P31645 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
SLC6A4P31645 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC6A4P31645 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
SLC6A4P31645 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.32■□□□□ 0.68
SLC6A4P31645 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC6A4P31645 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC6A4P31645 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
SLC6A4P31645 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SLC6A4P31645 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC6A4P31645 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC6A4P31645 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC6A4P31645 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
SLC6A4P31645 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC6A4P31645 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC6A4P31645 ARMC10P1-201ENST00000313754 855 ntBASIC19.31■□□□□ 0.68
SLC6A4P31645 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.31■□□□□ 0.68
SLC6A4P31645 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC6A4P31645 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.31■□□□□ 0.68
SLC6A4P31645 AP000523.1-201ENST00000398242 1049 ntBASIC19.31■□□□□ 0.68
SLC6A4P31645 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.31■□□□□ 0.68
SLC6A4P31645 KRT18P38-201ENST00000449496 1282 ntBASIC19.31■□□□□ 0.68
SLC6A4P31645 AL359075.1-203ENST00000462729 1002 ntBASIC19.31■□□□□ 0.68
SLC6A4P31645 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.31■□□□□ 0.68
SLC6A4P31645 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
SLC6A4P31645 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
SLC6A4P31645 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.31■□□□□ 0.68
SLC6A4P31645 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.31■□□□□ 0.68
SLC6A4P31645 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC6A4P31645 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC6A4P31645 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC6A4P31645 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.31■□□□□ 0.68
SLC6A4P31645 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.31■□□□□ 0.68
SLC6A4P31645 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
SLC6A4P31645 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC6A4P31645 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC6A4P31645 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.3■□□□□ 0.68
SLC6A4P31645 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
SLC6A4P31645 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC6A4P31645 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.3■□□□□ 0.68
SLC6A4P31645 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
SLC6A4P31645 MYC-208ENST00000641036 567 ntBASIC19.3■□□□□ 0.68
SLC6A4P31645 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.3■□□□□ 0.68
SLC6A4P31645 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.3■□□□□ 0.68
SLC6A4P31645 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
SLC6A4P31645 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.3■□□□□ 0.68
SLC6A4P31645 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC6A4P31645 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC6A4P31645 HEIH-201ENST00000623091 1652 ntBASIC19.3■□□□□ 0.68
SLC6A4P31645 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.3■□□□□ 0.68
SLC6A4P31645 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC6A4P31645 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
SLC6A4P31645 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
SLC6A4P31645 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC6A4P31645 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC6A4P31645 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC6A4P31645 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC6A4P31645 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.29■□□□□ 0.68
SLC6A4P31645 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC6A4P31645 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC6A4P31645 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC6A4P31645 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.29■□□□□ 0.68
SLC6A4P31645 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC6A4P31645 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.29■□□□□ 0.68
SLC6A4P31645 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SLC6A4P31645 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.29■□□□□ 0.68
SLC6A4P31645 AC024243.1-201ENST00000609234 778 ntBASIC19.29■□□□□ 0.68
SLC6A4P31645 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.29■□□□□ 0.68
SLC6A4P31645 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
SLC6A4P31645 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.29■□□□□ 0.68
SLC6A4P31645 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.29■□□□□ 0.68
SLC6A4P31645 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SLC6A4P31645 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
SLC6A4P31645 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms