Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.49■□□□□ 0.55
VARSP26640 AF186192.3-201ENST00000583427 947 ntBASIC18.49■□□□□ 0.55
VARSP26640 AC113410.3-201ENST00000623366 203 ntBASIC18.49■□□□□ 0.55
VARSP26640 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VARSP26640 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.49■□□□□ 0.55
VARSP26640 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.49■□□□□ 0.55
VARSP26640 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VARSP26640 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.49■□□□□ 0.55
VARSP26640 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.49■□□□□ 0.55
VARSP26640 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
VARSP26640 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VARSP26640 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
VARSP26640 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.49■□□□□ 0.55
VARSP26640 AL133373.2-201ENST00000623187 2828 ntBASIC18.49■□□□□ 0.55
VARSP26640 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.49■□□□□ 0.55
VARSP26640 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.49■□□□□ 0.55
VARSP26640 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.49■□□□□ 0.55
VARSP26640 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VARSP26640 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
VARSP26640 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
VARSP26640 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
VARSP26640 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
VARSP26640 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
VARSP26640 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
VARSP26640 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
VARSP26640 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
VARSP26640 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
VARSP26640 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
VARSP26640 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.48■□□□□ 0.55
VARSP26640 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
VARSP26640 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.48■□□□□ 0.55
VARSP26640 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VARSP26640 Z85996.1-201ENST00000494644 937 ntBASIC18.48■□□□□ 0.55
VARSP26640 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.48■□□□□ 0.55
VARSP26640 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.48■□□□□ 0.55
VARSP26640 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.48■□□□□ 0.55
VARSP26640 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.48■□□□□ 0.55
VARSP26640 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.48■□□□□ 0.55
VARSP26640 AL353708.3-201ENST00000610272 989 ntBASIC18.48■□□□□ 0.55
VARSP26640 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VARSP26640 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.48■□□□□ 0.55
VARSP26640 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VARSP26640 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
VARSP26640 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
VARSP26640 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
VARSP26640 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
VARSP26640 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
VARSP26640 KRT8P41-201ENST00000533985 1514 ntBASIC18.48■□□□□ 0.55
VARSP26640 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
VARSP26640 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VARSP26640 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.48■□□□□ 0.55
VARSP26640 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
VARSP26640 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VARSP26640 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
VARSP26640 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
VARSP26640 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
VARSP26640 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
VARSP26640 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VARSP26640 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.47■□□□□ 0.55
VARSP26640 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
VARSP26640 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.47■□□□□ 0.55
VARSP26640 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VARSP26640 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
VARSP26640 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
VARSP26640 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.47■□□□□ 0.55
VARSP26640 IRX1P1-201ENST00000438849 1838 ntBASIC18.47■□□□□ 0.55
VARSP26640 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VARSP26640 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VARSP26640 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
VARSP26640 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VARSP26640 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VARSP26640 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VARSP26640 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
VARSP26640 AC004980.1-204ENST00000429707 299 ntBASIC18.47■□□□□ 0.55
VARSP26640 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VARSP26640 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
VARSP26640 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.47■□□□□ 0.55
VARSP26640 CD177P1-201ENST00000606252 935 ntBASIC18.47■□□□□ 0.55
VARSP26640 AC012306.2-201ENST00000609350 630 ntBASIC18.47■□□□□ 0.55
VARSP26640 CR392000.1-201ENST00000624770 1228 ntBASIC18.47■□□□□ 0.55
VARSP26640 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.47■□□□□ 0.55
VARSP26640 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VARSP26640 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
VARSP26640 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
VARSP26640 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.47■□□□□ 0.55
VARSP26640 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VARSP26640 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.47■□□□□ 0.55
VARSP26640 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.47■□□□□ 0.55
VARSP26640 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VARSP26640 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VARSP26640 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VARSP26640 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.47■□□□□ 0.55
VARSP26640 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
VARSP26640 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
VARSP26640 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
VARSP26640 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
VARSP26640 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
VARSP26640 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
VARSP26640 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
VARSP26640 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms