Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CAPN3P20807 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CAPN3P20807 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.13■□□□□ 0.49
CAPN3P20807 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CAPN3P20807 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CAPN3P20807 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CAPN3P20807 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.12■□□□□ 0.49
CAPN3P20807 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CAPN3P20807 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CAPN3P20807 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CAPN3P20807 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
CAPN3P20807 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CAPN3P20807 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CAPN3P20807 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CAPN3P20807 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.12■□□□□ 0.49
CAPN3P20807 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CAPN3P20807 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.12■□□□□ 0.49
CAPN3P20807 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.12■□□□□ 0.49
CAPN3P20807 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CAPN3P20807 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CAPN3P20807 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.12■□□□□ 0.49
CAPN3P20807 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.12■□□□□ 0.49
CAPN3P20807 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CAPN3P20807 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.12■□□□□ 0.49
CAPN3P20807 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CAPN3P20807 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CAPN3P20807 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.12■□□□□ 0.49
CAPN3P20807 AC060766.5-201ENST00000590539 871 ntBASIC18.12■□□□□ 0.49
CAPN3P20807 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CAPN3P20807 HLA-B-256ENST00000639848 1089 ntBASIC18.12■□□□□ 0.49
CAPN3P20807 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CAPN3P20807 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CAPN3P20807 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CAPN3P20807 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CAPN3P20807 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CAPN3P20807 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CAPN3P20807 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.12■□□□□ 0.49
CAPN3P20807 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.12■□□□□ 0.49
CAPN3P20807 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CAPN3P20807 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CAPN3P20807 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.12■□□□□ 0.49
CAPN3P20807 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
CAPN3P20807 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
CAPN3P20807 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CAPN3P20807 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CAPN3P20807 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CAPN3P20807 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CAPN3P20807 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.11■□□□□ 0.49
CAPN3P20807 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CAPN3P20807 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CAPN3P20807 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CAPN3P20807 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CAPN3P20807 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.11■□□□□ 0.49
CAPN3P20807 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CAPN3P20807 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.11■□□□□ 0.49
CAPN3P20807 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CAPN3P20807 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.11■□□□□ 0.49
CAPN3P20807 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
CAPN3P20807 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
CAPN3P20807 C1QBPP2-201ENST00000528754 825 ntBASIC18.11■□□□□ 0.49
CAPN3P20807 PNMA6B-201ENST00000538162 1200 ntBASIC18.11■□□□□ 0.49
CAPN3P20807 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.11■□□□□ 0.49
CAPN3P20807 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.11■□□□□ 0.49
CAPN3P20807 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.11■□□□□ 0.49
CAPN3P20807 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.11■□□□□ 0.49
CAPN3P20807 AC120498.8-201ENST00000614275 531 ntBASIC18.11■□□□□ 0.49
CAPN3P20807 AL121829.2-201ENST00000620908 328 ntBASIC18.11■□□□□ 0.49
CAPN3P20807 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CAPN3P20807 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CAPN3P20807 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.11■□□□□ 0.49
CAPN3P20807 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CAPN3P20807 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CAPN3P20807 AC067852.2-201ENST00000590513 2313 ntBASIC18.11■□□□□ 0.49
CAPN3P20807 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CAPN3P20807 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CAPN3P20807 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.11■□□□□ 0.49
CAPN3P20807 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.11■□□□□ 0.49
CAPN3P20807 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CAPN3P20807 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CAPN3P20807 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CAPN3P20807 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CAPN3P20807 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CAPN3P20807 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
CAPN3P20807 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CAPN3P20807 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CAPN3P20807 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CAPN3P20807 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CAPN3P20807 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
CAPN3P20807 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CAPN3P20807 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
CAPN3P20807 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.1■□□□□ 0.49
CAPN3P20807 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.1■□□□□ 0.49
CAPN3P20807 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.1■□□□□ 0.49
CAPN3P20807 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CAPN3P20807 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CAPN3P20807 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
CAPN3P20807 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CAPN3P20807 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CAPN3P20807 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.1■□□□□ 0.49
CAPN3P20807 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms