Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC15.31■□□□□ 0.04
DEFA4P12838 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC15.31■□□□□ 0.04
DEFA4P12838 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
DEFA4P12838 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC15.31■□□□□ 0.04
DEFA4P12838 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
DEFA4P12838 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
DEFA4P12838 KRT8P8-201ENST00000434750 1448 ntBASIC15.31■□□□□ 0.04
DEFA4P12838 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
DEFA4P12838 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DEFA4P12838 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC15.31■□□□□ 0.04
DEFA4P12838 TEX21P-204ENST00000641479 1693 ntBASIC15.31■□□□□ 0.04
DEFA4P12838 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
DEFA4P12838 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
DEFA4P12838 ZNF815P-204ENST00000434898 1737 ntBASIC15.31■□□□□ 0.04
DEFA4P12838 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC15.31■□□□□ 0.04
DEFA4P12838 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DEFA4P12838 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DEFA4P12838 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC15.31■□□□□ 0.04
DEFA4P12838 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DEFA4P12838 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DEFA4P12838 AC135050.7-201ENST00000624508 2218 ntBASIC15.31■□□□□ 0.04
DEFA4P12838 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
DEFA4P12838 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DEFA4P12838 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
DEFA4P12838 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
DEFA4P12838 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
DEFA4P12838 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DEFA4P12838 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
DEFA4P12838 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DEFA4P12838 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DEFA4P12838 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DEFA4P12838 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DEFA4P12838 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DEFA4P12838 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DEFA4P12838 TREX2-204ENST00000370212 861 ntTSL 5 BASIC15.3■□□□□ 0.04
DEFA4P12838 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
DEFA4P12838 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC15.3■□□□□ 0.04
DEFA4P12838 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DEFA4P12838 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
DEFA4P12838 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
DEFA4P12838 KRT17P3-201ENST00000420566 1262 ntBASIC15.3■□□□□ 0.04
DEFA4P12838 POM121L13P-201ENST00000422362 380 ntBASIC15.3■□□□□ 0.04
DEFA4P12838 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC15.3■□□□□ 0.04
DEFA4P12838 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
DEFA4P12838 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC15.3■□□□□ 0.04
DEFA4P12838 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC15.3■□□□□ 0.04
DEFA4P12838 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC15.3■□□□□ 0.04
DEFA4P12838 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
DEFA4P12838 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
DEFA4P12838 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC15.3■□□□□ 0.04
DEFA4P12838 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
DEFA4P12838 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC15.3■□□□□ 0.04
DEFA4P12838 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
DEFA4P12838 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DEFA4P12838 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DEFA4P12838 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DEFA4P12838 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
DEFA4P12838 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC15.29■□□□□ 0.04
DEFA4P12838 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
DEFA4P12838 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC15.29■□□□□ 0.04
DEFA4P12838 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
DEFA4P12838 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
DEFA4P12838 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
DEFA4P12838 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
DEFA4P12838 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
DEFA4P12838 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
DEFA4P12838 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
DEFA4P12838 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
DEFA4P12838 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC15.29■□□□□ 0.04
DEFA4P12838 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC15.29■□□□□ 0.04
DEFA4P12838 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
DEFA4P12838 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
DEFA4P12838 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC15.29■□□□□ 0.04
DEFA4P12838 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
DEFA4P12838 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
DEFA4P12838 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
DEFA4P12838 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC15.29■□□□□ 0.04
DEFA4P12838 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
DEFA4P12838 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC15.29■□□□□ 0.04
DEFA4P12838 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
DEFA4P12838 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC15.29■□□□□ 0.04
DEFA4P12838 THEM4-205ENST00000489410 643 ntTSL 2 BASIC15.29■□□□□ 0.04
DEFA4P12838 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC15.29■□□□□ 0.04
DEFA4P12838 UNC93B5-201ENST00000530315 699 ntBASIC15.29■□□□□ 0.04
DEFA4P12838 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC15.29■□□□□ 0.04
DEFA4P12838 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
DEFA4P12838 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC15.29■□□□□ 0.04
DEFA4P12838 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
DEFA4P12838 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
DEFA4P12838 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
DEFA4P12838 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
DEFA4P12838 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
DEFA4P12838 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
DEFA4P12838 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
DEFA4P12838 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC15.29■□□□□ 0.04
DEFA4P12838 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
DEFA4P12838 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
DEFA4P12838 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
DEFA4P12838 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
DEFA4P12838 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms