Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RARAP10276 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RARAP10276 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RARAP10276 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RARAP10276 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.77■□□□□ 0.76
RARAP10276 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RARAP10276 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
RARAP10276 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
RARAP10276 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RARAP10276 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RARAP10276 AC004951.3-201ENST00000418645 1148 ntBASIC19.77■□□□□ 0.76
RARAP10276 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.77■□□□□ 0.76
RARAP10276 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
RARAP10276 AC008040.2-201ENST00000461049 708 ntBASIC19.77■□□□□ 0.76
RARAP10276 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
RARAP10276 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
RARAP10276 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
RARAP10276 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RARAP10276 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
RARAP10276 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.77■□□□□ 0.76
RARAP10276 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
RARAP10276 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.75
RARAP10276 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RARAP10276 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.76■□□□□ 0.75
RARAP10276 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RARAP10276 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
RARAP10276 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.76■□□□□ 0.75
RARAP10276 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.76■□□□□ 0.75
RARAP10276 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RARAP10276 AC079598.2-202ENST00000546624 1451 ntBASIC19.76■□□□□ 0.75
RARAP10276 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RARAP10276 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RARAP10276 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RARAP10276 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
RARAP10276 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
RARAP10276 AC026271.3-201ENST00000571884 352 ntBASIC19.76■□□□□ 0.75
RARAP10276 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.76■□□□□ 0.75
RARAP10276 WAC-202ENST00000347934 2839 ntTSL 5 BASIC19.76■□□□□ 0.75
RARAP10276 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
RARAP10276 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RARAP10276 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RARAP10276 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RARAP10276 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RARAP10276 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
RARAP10276 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RARAP10276 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RARAP10276 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RARAP10276 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
RARAP10276 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RARAP10276 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RARAP10276 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RARAP10276 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RARAP10276 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.75■□□□□ 0.75
RARAP10276 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RARAP10276 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RARAP10276 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
RARAP10276 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RARAP10276 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
RARAP10276 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RARAP10276 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
RARAP10276 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
RARAP10276 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RARAP10276 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RARAP10276 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.75■□□□□ 0.75
RARAP10276 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RARAP10276 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.75■□□□□ 0.75
RARAP10276 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.75■□□□□ 0.75
RARAP10276 FAM197Y1-201ENST00000421178 764 ntBASIC19.75■□□□□ 0.75
RARAP10276 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.75■□□□□ 0.75
RARAP10276 UBE2SP1-201ENST00000450587 669 ntBASIC19.75■□□□□ 0.75
RARAP10276 AC011506.1-201ENST00000474329 610 ntBASIC19.75■□□□□ 0.75
RARAP10276 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RARAP10276 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.75■□□□□ 0.75
RARAP10276 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
RARAP10276 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.75■□□□□ 0.75
RARAP10276 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.75■□□□□ 0.75
RARAP10276 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RARAP10276 AL354751.1-201ENST00000412768 1863 ntBASIC19.75■□□□□ 0.75
RARAP10276 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RARAP10276 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RARAP10276 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RARAP10276 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RARAP10276 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RARAP10276 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RARAP10276 AC018470.1-201ENST00000624790 3129 ntBASIC19.74■□□□□ 0.75
RARAP10276 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RARAP10276 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.74■□□□□ 0.75
RARAP10276 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RARAP10276 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.74■□□□□ 0.75
RARAP10276 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.74■□□□□ 0.75
RARAP10276 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RARAP10276 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
RARAP10276 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RARAP10276 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RARAP10276 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RARAP10276 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RARAP10276 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.74■□□□□ 0.75
RARAP10276 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RARAP10276 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
RARAP10276 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms