Protein–RNA interactions for Protein: P0DMR1

HNRNPCL4, Heterogeneous nuclear ribonucleoprotein C-like 4, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPCL4P0DMR1 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
HNRNPCL4P0DMR1 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.5■□□□□ 0.39
HNRNPCL4P0DMR1 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.5■□□□□ 0.39
HNRNPCL4P0DMR1 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HNRNPCL4P0DMR1 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.5■□□□□ 0.39
HNRNPCL4P0DMR1 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HNRNPCL4P0DMR1 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
HNRNPCL4P0DMR1 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HNRNPCL4P0DMR1 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HNRNPCL4P0DMR1 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HNRNPCL4P0DMR1 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HNRNPCL4P0DMR1 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
HNRNPCL4P0DMR1 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
HNRNPCL4P0DMR1 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HNRNPCL4P0DMR1 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.5■□□□□ 0.39
HNRNPCL4P0DMR1 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HNRNPCL4P0DMR1 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HNRNPCL4P0DMR1 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
HNRNPCL4P0DMR1 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HNRNPCL4P0DMR1 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
HNRNPCL4P0DMR1 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
HNRNPCL4P0DMR1 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HNRNPCL4P0DMR1 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
HNRNPCL4P0DMR1 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.49■□□□□ 0.39
HNRNPCL4P0DMR1 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HNRNPCL4P0DMR1 KRT8P3-201ENST00000519669 1449 ntBASIC17.49■□□□□ 0.39
HNRNPCL4P0DMR1 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.49■□□□□ 0.39
HNRNPCL4P0DMR1 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HNRNPCL4P0DMR1 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HNRNPCL4P0DMR1 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HNRNPCL4P0DMR1 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HNRNPCL4P0DMR1 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
HNRNPCL4P0DMR1 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.49■□□□□ 0.39
HNRNPCL4P0DMR1 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HNRNPCL4P0DMR1 C1QBPP2-201ENST00000528754 825 ntBASIC17.49■□□□□ 0.39
HNRNPCL4P0DMR1 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
HNRNPCL4P0DMR1 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.49■□□□□ 0.39
HNRNPCL4P0DMR1 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.49■□□□□ 0.39
HNRNPCL4P0DMR1 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HNRNPCL4P0DMR1 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HNRNPCL4P0DMR1 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
HNRNPCL4P0DMR1 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HNRNPCL4P0DMR1 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
HNRNPCL4P0DMR1 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.49■□□□□ 0.39
HNRNPCL4P0DMR1 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.49■□□□□ 0.39
HNRNPCL4P0DMR1 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HNRNPCL4P0DMR1 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HNRNPCL4P0DMR1 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HNRNPCL4P0DMR1 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HNRNPCL4P0DMR1 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HNRNPCL4P0DMR1 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.49■□□□□ 0.39
HNRNPCL4P0DMR1 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HNRNPCL4P0DMR1 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
HNRNPCL4P0DMR1 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.48■□□□□ 0.39
HNRNPCL4P0DMR1 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HNRNPCL4P0DMR1 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
HNRNPCL4P0DMR1 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HNRNPCL4P0DMR1 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.48■□□□□ 0.39
HNRNPCL4P0DMR1 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HNRNPCL4P0DMR1 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.48■□□□□ 0.39
HNRNPCL4P0DMR1 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.48■□□□□ 0.39
HNRNPCL4P0DMR1 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HNRNPCL4P0DMR1 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HNRNPCL4P0DMR1 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HNRNPCL4P0DMR1 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HNRNPCL4P0DMR1 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
HNRNPCL4P0DMR1 AC004951.3-201ENST00000418645 1148 ntBASIC17.48■□□□□ 0.39
HNRNPCL4P0DMR1 AC091390.4-202ENST00000476426 537 ntBASIC17.48■□□□□ 0.39
HNRNPCL4P0DMR1 CD99P1-205ENST00000527459 561 ntBASIC17.48■□□□□ 0.39
HNRNPCL4P0DMR1 AC068587.9-201ENST00000641814 219 ntBASIC17.48■□□□□ 0.39
HNRNPCL4P0DMR1 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HNRNPCL4P0DMR1 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HNRNPCL4P0DMR1 AC135050.7-201ENST00000624508 2218 ntBASIC17.48■□□□□ 0.39
HNRNPCL4P0DMR1 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HNRNPCL4P0DMR1 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.48■□□□□ 0.39
HNRNPCL4P0DMR1 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
HNRNPCL4P0DMR1 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.48■□□□□ 0.39
HNRNPCL4P0DMR1 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.47■□□□□ 0.39
HNRNPCL4P0DMR1 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.47■□□□□ 0.39
HNRNPCL4P0DMR1 KRT16P1-201ENST00000399124 1418 ntBASIC17.47■□□□□ 0.39
HNRNPCL4P0DMR1 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HNRNPCL4P0DMR1 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HNRNPCL4P0DMR1 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
HNRNPCL4P0DMR1 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
HNRNPCL4P0DMR1 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.47■□□□□ 0.39
HNRNPCL4P0DMR1 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HNRNPCL4P0DMR1 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.47■□□□□ 0.39
HNRNPCL4P0DMR1 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HNRNPCL4P0DMR1 AC026271.3-201ENST00000571884 352 ntBASIC17.47■□□□□ 0.39
HNRNPCL4P0DMR1 AL031985.4-201ENST00000642138 673 ntBASIC17.47■□□□□ 0.39
HNRNPCL4P0DMR1 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.47■□□□□ 0.39
HNRNPCL4P0DMR1 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.47■□□□□ 0.39
HNRNPCL4P0DMR1 KRT8P32-201ENST00000512863 1461 ntBASIC17.47■□□□□ 0.39
HNRNPCL4P0DMR1 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.47■□□□□ 0.39
HNRNPCL4P0DMR1 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HNRNPCL4P0DMR1 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
HNRNPCL4P0DMR1 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HNRNPCL4P0DMR1 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
HNRNPCL4P0DMR1 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HNRNPCL4P0DMR1 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms