Protein–RNA interactions for Protein: P0DJD0

RGPD1, RANBP2-like and GRIP domain-containing protein 1, humanhuman

Predictions only

Length 1,748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1P0DJD0 LINC00265-3P-201ENST00000447588 903 ntBASIC25.07■■□□□ 1.6
RGPD1P0DJD0 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC25.07■■□□□ 1.6
RGPD1P0DJD0 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
RGPD1P0DJD0 FOSL1P1-201ENST00000511041 816 ntBASIC25.07■■□□□ 1.6
RGPD1P0DJD0 SLC25A1P1-201ENST00000528351 927 ntBASIC25.07■■□□□ 1.6
RGPD1P0DJD0 AC091304.2-201ENST00000564639 760 ntBASIC25.07■■□□□ 1.6
RGPD1P0DJD0 CALM3-211ENST00000598871 561 ntTSL 4 BASIC25.07■■□□□ 1.6
RGPD1P0DJD0 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
RGPD1P0DJD0 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
RGPD1P0DJD0 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC25.07■■□□□ 1.6
RGPD1P0DJD0 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
RGPD1P0DJD0 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
RGPD1P0DJD0 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
RGPD1P0DJD0 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
RGPD1P0DJD0 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC25.07■■□□□ 1.6
RGPD1P0DJD0 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
RGPD1P0DJD0 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
RGPD1P0DJD0 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC25.07■■□□□ 1.6
RGPD1P0DJD0 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
RGPD1P0DJD0 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC25.06■■□□□ 1.6
RGPD1P0DJD0 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC25.06■■□□□ 1.6
RGPD1P0DJD0 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC25.06■■□□□ 1.6
RGPD1P0DJD0 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
RGPD1P0DJD0 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC25.06■■□□□ 1.6
RGPD1P0DJD0 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC25.06■■□□□ 1.6
RGPD1P0DJD0 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC25.06■■□□□ 1.6
RGPD1P0DJD0 TOB2P1-201ENST00000469761 992 ntBASIC25.06■■□□□ 1.6
RGPD1P0DJD0 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC25.06■■□□□ 1.6
RGPD1P0DJD0 IL11-204ENST00000590625 1028 ntTSL 2 BASIC25.06■■□□□ 1.6
RGPD1P0DJD0 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
RGPD1P0DJD0 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
RGPD1P0DJD0 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC25.06■■□□□ 1.6
RGPD1P0DJD0 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC25.06■■□□□ 1.6
RGPD1P0DJD0 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
RGPD1P0DJD0 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
RGPD1P0DJD0 ENSA-205ENST00000361532 792 ntTSL 2 BASIC25.06■■□□□ 1.6
RGPD1P0DJD0 KRT18P58-201ENST00000527480 1120 ntBASIC25.06■■□□□ 1.6
RGPD1P0DJD0 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC25.06■■□□□ 1.6
RGPD1P0DJD0 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
RGPD1P0DJD0 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
RGPD1P0DJD0 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
RGPD1P0DJD0 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC25.05■■□□□ 1.6
RGPD1P0DJD0 AC141586.3-201ENST00000562166 1838 ntBASIC25.05■■□□□ 1.6
RGPD1P0DJD0 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RGPD1P0DJD0 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC25.05■■□□□ 1.6
RGPD1P0DJD0 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RGPD1P0DJD0 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
RGPD1P0DJD0 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC25.05■■□□□ 1.6
RGPD1P0DJD0 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
RGPD1P0DJD0 AKR1C7P-201ENST00000305623 895 ntBASIC25.05■■□□□ 1.6
RGPD1P0DJD0 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC25.05■■□□□ 1.6
RGPD1P0DJD0 AP001005.1-201ENST00000571755 1248 ntBASIC25.05■■□□□ 1.6
RGPD1P0DJD0 AC138894.3-201ENST00000603787 634 ntBASIC25.05■■□□□ 1.6
RGPD1P0DJD0 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC25.05■■□□□ 1.6
RGPD1P0DJD0 AL162741.1-201ENST00000565563 1558 ntBASIC25.05■■□□□ 1.6
RGPD1P0DJD0 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC25.05■■□□□ 1.6
RGPD1P0DJD0 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
RGPD1P0DJD0 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC25.04■■□□□ 1.6
RGPD1P0DJD0 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC25.04■■□□□ 1.6
RGPD1P0DJD0 MCCD1P1-208ENST00000445732 328 ntBASIC25.04■■□□□ 1.6
RGPD1P0DJD0 AP000867.3-201ENST00000524675 377 ntBASIC25.04■■□□□ 1.6
RGPD1P0DJD0 TP73-AS1-207ENST00000624167 988 ntBASIC25.04■■□□□ 1.6
RGPD1P0DJD0 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RGPD1P0DJD0 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC25.04■■□□□ 1.6
RGPD1P0DJD0 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC25.04■■□□□ 1.6
RGPD1P0DJD0 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RGPD1P0DJD0 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC25.04■■□□□ 1.6
RGPD1P0DJD0 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RGPD1P0DJD0 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RGPD1P0DJD0 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC25.04■■□□□ 1.6
RGPD1P0DJD0 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC25.03■■□□□ 1.6
RGPD1P0DJD0 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC25.03■■□□□ 1.6
RGPD1P0DJD0 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC25.03■■□□□ 1.6
RGPD1P0DJD0 VPS51-217ENST00000639871 243 ntTSL 5 BASIC25.03■■□□□ 1.6
RGPD1P0DJD0 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
RGPD1P0DJD0 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
RGPD1P0DJD0 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
RGPD1P0DJD0 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC25.03■■□□□ 1.6
RGPD1P0DJD0 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC25.03■■□□□ 1.6
RGPD1P0DJD0 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC25.03■■□□□ 1.6
RGPD1P0DJD0 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
RGPD1P0DJD0 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
RGPD1P0DJD0 IRX1P1-201ENST00000438849 1838 ntBASIC25.03■■□□□ 1.6
RGPD1P0DJD0 UBQLN4P1-201ENST00000461599 1801 ntBASIC25.03■■□□□ 1.6
RGPD1P0DJD0 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC25.03■■□□□ 1.6
RGPD1P0DJD0 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC25.03■■□□□ 1.6
RGPD1P0DJD0 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC25.03■■□□□ 1.6
RGPD1P0DJD0 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC25.03■■□□□ 1.6
RGPD1P0DJD0 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC25.03■■□□□ 1.6
RGPD1P0DJD0 KATNBL1P6-202ENST00000562413 1466 ntBASIC25.03■■□□□ 1.6
RGPD1P0DJD0 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC25.03■■□□□ 1.6
RGPD1P0DJD0 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC25.03■■□□□ 1.6
RGPD1P0DJD0 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC25.02■■□□□ 1.6
RGPD1P0DJD0 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
RGPD1P0DJD0 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
RGPD1P0DJD0 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC25.02■■□□□ 1.6
RGPD1P0DJD0 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
RGPD1P0DJD0 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC25.02■■□□□ 1.6
RGPD1P0DJD0 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
RGPD1P0DJD0 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms