Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ERCC1P07992 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
ERCC1P07992 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
ERCC1P07992 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ERCC1P07992 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
ERCC1P07992 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
ERCC1P07992 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ERCC1P07992 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
ERCC1P07992 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
ERCC1P07992 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
ERCC1P07992 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ERCC1P07992 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ERCC1P07992 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC16.7■□□□□ 0.26
ERCC1P07992 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
ERCC1P07992 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ERCC1P07992 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.7■□□□□ 0.26
ERCC1P07992 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ERCC1P07992 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.7■□□□□ 0.26
ERCC1P07992 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ERCC1P07992 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ERCC1P07992 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC16.7■□□□□ 0.26
ERCC1P07992 FAM197Y1-201ENST00000421178 764 ntBASIC16.7■□□□□ 0.26
ERCC1P07992 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ERCC1P07992 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC16.7■□□□□ 0.26
ERCC1P07992 FDX2-207ENST00000494368 584 ntTSL 4 BASIC16.7■□□□□ 0.26
ERCC1P07992 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
ERCC1P07992 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC16.7■□□□□ 0.26
ERCC1P07992 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC16.7■□□□□ 0.26
ERCC1P07992 AP003071.4-201ENST00000562276 1284 ntBASIC16.7■□□□□ 0.26
ERCC1P07992 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
ERCC1P07992 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC16.7■□□□□ 0.26
ERCC1P07992 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
ERCC1P07992 LINC01023-201ENST00000606054 436 ntBASIC16.7■□□□□ 0.26
ERCC1P07992 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ERCC1P07992 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ERCC1P07992 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
ERCC1P07992 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ERCC1P07992 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ERCC1P07992 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC16.7■□□□□ 0.26
ERCC1P07992 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ERCC1P07992 KRT16P1-201ENST00000399124 1418 ntBASIC16.7■□□□□ 0.26
ERCC1P07992 SRI-203ENST00000419179 1307 ntTSL 2 BASIC16.7■□□□□ 0.26
ERCC1P07992 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC16.69■□□□□ 0.26
ERCC1P07992 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
ERCC1P07992 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ERCC1P07992 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC16.69■□□□□ 0.26
ERCC1P07992 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ERCC1P07992 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
ERCC1P07992 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
ERCC1P07992 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ERCC1P07992 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC16.69■□□□□ 0.26
ERCC1P07992 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC16.69■□□□□ 0.26
ERCC1P07992 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ERCC1P07992 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC16.69■□□□□ 0.26
ERCC1P07992 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
ERCC1P07992 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
ERCC1P07992 NIFKP9-201ENST00000419265 221 ntBASIC16.69■□□□□ 0.26
ERCC1P07992 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC16.69■□□□□ 0.26
ERCC1P07992 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC16.69■□□□□ 0.26
ERCC1P07992 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC16.69■□□□□ 0.26
ERCC1P07992 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC16.69■□□□□ 0.26
ERCC1P07992 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC16.69■□□□□ 0.26
ERCC1P07992 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC16.69■□□□□ 0.26
ERCC1P07992 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
ERCC1P07992 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ERCC1P07992 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ERCC1P07992 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ERCC1P07992 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
ERCC1P07992 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ERCC1P07992 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.69■□□□□ 0.26
ERCC1P07992 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ERCC1P07992 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.69■□□□□ 0.26
ERCC1P07992 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
ERCC1P07992 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ERCC1P07992 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ERCC1P07992 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
ERCC1P07992 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
ERCC1P07992 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
ERCC1P07992 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
ERCC1P07992 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ERCC1P07992 AC006333.2-201ENST00000607957 2099 ntBASIC16.68■□□□□ 0.26
ERCC1P07992 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ERCC1P07992 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
ERCC1P07992 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
ERCC1P07992 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
ERCC1P07992 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ERCC1P07992 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC16.68■□□□□ 0.26
ERCC1P07992 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC16.68■□□□□ 0.26
ERCC1P07992 NME1-207ENST00000480143 964 ntTSL 2 BASIC16.68■□□□□ 0.26
ERCC1P07992 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC16.68■□□□□ 0.26
ERCC1P07992 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC16.68■□□□□ 0.26
ERCC1P07992 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC16.68■□□□□ 0.26
ERCC1P07992 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC16.68■□□□□ 0.26
ERCC1P07992 SNX21-213ENST00000614929 587 ntTSL 5 BASIC16.68■□□□□ 0.26
ERCC1P07992 CR392000.1-201ENST00000624770 1228 ntBASIC16.68■□□□□ 0.26
ERCC1P07992 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ERCC1P07992 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
ERCC1P07992 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.68■□□□□ 0.26
ERCC1P07992 AC005082.1-201ENST00000413042 2259 ntBASIC16.68■□□□□ 0.26
ERCC1P07992 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms