Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.53■□□□□ 0.56
CAPN1P07384 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.53■□□□□ 0.56
CAPN1P07384 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CAPN1P07384 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CAPN1P07384 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CAPN1P07384 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
CAPN1P07384 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.52■□□□□ 0.56
CAPN1P07384 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CAPN1P07384 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
CAPN1P07384 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CAPN1P07384 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CAPN1P07384 NEFHP1-201ENST00000412845 2629 ntBASIC18.52■□□□□ 0.56
CAPN1P07384 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CAPN1P07384 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
CAPN1P07384 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CAPN1P07384 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CAPN1P07384 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
CAPN1P07384 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.52■□□□□ 0.56
CAPN1P07384 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.52■□□□□ 0.56
CAPN1P07384 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CAPN1P07384 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.52■□□□□ 0.56
CAPN1P07384 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CAPN1P07384 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.52■□□□□ 0.56
CAPN1P07384 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CAPN1P07384 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.52■□□□□ 0.56
CAPN1P07384 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.52■□□□□ 0.56
CAPN1P07384 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CAPN1P07384 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CAPN1P07384 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CAPN1P07384 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CAPN1P07384 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
CAPN1P07384 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.52■□□□□ 0.55
CAPN1P07384 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
CAPN1P07384 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CAPN1P07384 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
CAPN1P07384 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
CAPN1P07384 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CAPN1P07384 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.52■□□□□ 0.55
CAPN1P07384 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CAPN1P07384 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
CAPN1P07384 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CAPN1P07384 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CAPN1P07384 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CAPN1P07384 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CAPN1P07384 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
CAPN1P07384 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CAPN1P07384 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CAPN1P07384 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CAPN1P07384 KRT8P9-201ENST00000558927 1449 ntBASIC18.51■□□□□ 0.55
CAPN1P07384 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CAPN1P07384 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.51■□□□□ 0.55
CAPN1P07384 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.51■□□□□ 0.55
CAPN1P07384 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CAPN1P07384 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CAPN1P07384 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CAPN1P07384 KRT18P21-201ENST00000515767 1272 ntBASIC18.51■□□□□ 0.55
CAPN1P07384 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.51■□□□□ 0.55
CAPN1P07384 AP000525.1-201ENST00000608286 694 ntBASIC18.51■□□□□ 0.55
CAPN1P07384 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
CAPN1P07384 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CAPN1P07384 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CAPN1P07384 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.51■□□□□ 0.55
CAPN1P07384 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CAPN1P07384 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CAPN1P07384 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CAPN1P07384 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CAPN1P07384 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CAPN1P07384 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.51■□□□□ 0.55
CAPN1P07384 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CAPN1P07384 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CAPN1P07384 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.5■□□□□ 0.55
CAPN1P07384 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CAPN1P07384 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CAPN1P07384 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CAPN1P07384 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CAPN1P07384 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CAPN1P07384 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CAPN1P07384 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CAPN1P07384 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CAPN1P07384 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
CAPN1P07384 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.5■□□□□ 0.55
CAPN1P07384 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CAPN1P07384 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CAPN1P07384 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.5■□□□□ 0.55
CAPN1P07384 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.5■□□□□ 0.55
CAPN1P07384 UNC93B2-201ENST00000285383 730 ntBASIC18.5■□□□□ 0.55
CAPN1P07384 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CAPN1P07384 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.5■□□□□ 0.55
CAPN1P07384 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.5■□□□□ 0.55
CAPN1P07384 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.5■□□□□ 0.55
CAPN1P07384 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.5■□□□□ 0.55
CAPN1P07384 HLA-A-209ENST00000638375 975 ntBASIC18.5■□□□□ 0.55
CAPN1P07384 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CAPN1P07384 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.5■□□□□ 0.55
CAPN1P07384 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.5■□□□□ 0.55
CAPN1P07384 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CAPN1P07384 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CAPN1P07384 AL031598.1-201ENST00000561511 1773 ntBASIC18.5■□□□□ 0.55
CAPN1P07384 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
CAPN1P07384 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms