Protein–RNA interactions for Protein: P04350

TUBB4A, Tubulin beta-4A chain, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4AP04350 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TUBB4AP04350 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
TUBB4AP04350 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
TUBB4AP04350 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC20.18■□□□□ 0.82
TUBB4AP04350 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC20.18■□□□□ 0.82
TUBB4AP04350 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
TUBB4AP04350 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TUBB4AP04350 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TUBB4AP04350 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TUBB4AP04350 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.18■□□□□ 0.82
TUBB4AP04350 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.18■□□□□ 0.82
TUBB4AP04350 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TUBB4AP04350 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TUBB4AP04350 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
TUBB4AP04350 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TUBB4AP04350 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
TUBB4AP04350 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TUBB4AP04350 AC012313.1-201ENST00000593393 3059 ntBASIC20.18■□□□□ 0.82
TUBB4AP04350 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TUBB4AP04350 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TUBB4AP04350 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
TUBB4AP04350 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TUBB4AP04350 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
TUBB4AP04350 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TUBB4AP04350 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC20.17■□□□□ 0.82
TUBB4AP04350 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TUBB4AP04350 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
TUBB4AP04350 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.17■□□□□ 0.82
TUBB4AP04350 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.17■□□□□ 0.82
TUBB4AP04350 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.17■□□□□ 0.82
TUBB4AP04350 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.17■□□□□ 0.82
TUBB4AP04350 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
TUBB4AP04350 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TUBB4AP04350 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
TUBB4AP04350 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TUBB4AP04350 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TUBB4AP04350 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TUBB4AP04350 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TUBB4AP04350 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC20.16■□□□□ 0.82
TUBB4AP04350 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
TUBB4AP04350 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TUBB4AP04350 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TUBB4AP04350 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
TUBB4AP04350 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
TUBB4AP04350 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
TUBB4AP04350 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
TUBB4AP04350 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC20.16■□□□□ 0.82
TUBB4AP04350 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TUBB4AP04350 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TUBB4AP04350 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TUBB4AP04350 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.16■□□□□ 0.82
TUBB4AP04350 YBX1P10-201ENST00000444752 975 ntBASIC20.16■□□□□ 0.82
TUBB4AP04350 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.16■□□□□ 0.82
TUBB4AP04350 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.16■□□□□ 0.82
TUBB4AP04350 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.16■□□□□ 0.82
TUBB4AP04350 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TUBB4AP04350 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TUBB4AP04350 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC20.16■□□□□ 0.82
TUBB4AP04350 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TUBB4AP04350 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
TUBB4AP04350 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
TUBB4AP04350 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
TUBB4AP04350 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
TUBB4AP04350 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC20.16■□□□□ 0.82
TUBB4AP04350 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
TUBB4AP04350 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.16■□□□□ 0.82
TUBB4AP04350 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TUBB4AP04350 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TUBB4AP04350 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC20.16■□□□□ 0.82
TUBB4AP04350 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC20.15■□□□□ 0.82
TUBB4AP04350 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC20.15■□□□□ 0.82
TUBB4AP04350 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TUBB4AP04350 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
TUBB4AP04350 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TUBB4AP04350 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TUBB4AP04350 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TUBB4AP04350 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TUBB4AP04350 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TUBB4AP04350 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
TUBB4AP04350 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.15■□□□□ 0.82
TUBB4AP04350 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TUBB4AP04350 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.15■□□□□ 0.82
TUBB4AP04350 AC112777.1-201ENST00000540175 1423 ntBASIC20.15■□□□□ 0.82
TUBB4AP04350 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TUBB4AP04350 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TUBB4AP04350 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TUBB4AP04350 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TUBB4AP04350 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TUBB4AP04350 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TUBB4AP04350 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
TUBB4AP04350 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC20.15■□□□□ 0.82
TUBB4AP04350 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TUBB4AP04350 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TUBB4AP04350 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TUBB4AP04350 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TUBB4AP04350 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TUBB4AP04350 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
TUBB4AP04350 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
TUBB4AP04350 PCDHA12-202ENST00000613593 2588 ntBASIC20.14■□□□□ 0.82
TUBB4AP04350 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms