Protein–RNA interactions for Protein: P04035

HMGCR, 3-hydroxy-3-methylglutaryl-coenzyme A reductase, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCRP04035 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
HMGCRP04035 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC21.24■□□□□ 0.99
HMGCRP04035 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
HMGCRP04035 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HMGCRP04035 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
HMGCRP04035 KRT8P3-201ENST00000519669 1449 ntBASIC21.23■□□□□ 0.99
HMGCRP04035 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HMGCRP04035 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HMGCRP04035 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
HMGCRP04035 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC21.23■□□□□ 0.99
HMGCRP04035 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC21.23■□□□□ 0.99
HMGCRP04035 IGHV3-41-201ENST00000613121 348 ntBASIC21.23■□□□□ 0.99
HMGCRP04035 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC21.23■□□□□ 0.99
HMGCRP04035 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HMGCRP04035 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HMGCRP04035 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.23■□□□□ 0.99
HMGCRP04035 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC21.23■□□□□ 0.99
HMGCRP04035 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC21.23■□□□□ 0.99
HMGCRP04035 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
HMGCRP04035 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
HMGCRP04035 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
HMGCRP04035 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC21.22■□□□□ 0.99
HMGCRP04035 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21.22■□□□□ 0.99
HMGCRP04035 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HMGCRP04035 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HMGCRP04035 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
HMGCRP04035 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HMGCRP04035 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
HMGCRP04035 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HMGCRP04035 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HMGCRP04035 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HMGCRP04035 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HMGCRP04035 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC21.22■□□□□ 0.99
HMGCRP04035 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC21.22■□□□□ 0.99
HMGCRP04035 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC21.22■□□□□ 0.99
HMGCRP04035 AL390719.2-201ENST00000606993 987 ntBASIC21.22■□□□□ 0.99
HMGCRP04035 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HMGCRP04035 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
HMGCRP04035 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HMGCRP04035 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
HMGCRP04035 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC21.22■□□□□ 0.99
HMGCRP04035 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC21.22■□□□□ 0.99
HMGCRP04035 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HMGCRP04035 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HMGCRP04035 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HMGCRP04035 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.22■□□□□ 0.99
HMGCRP04035 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
HMGCRP04035 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
HMGCRP04035 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HMGCRP04035 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.21■□□□□ 0.99
HMGCRP04035 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
HMGCRP04035 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HMGCRP04035 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HMGCRP04035 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
HMGCRP04035 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC21.21■□□□□ 0.99
HMGCRP04035 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HMGCRP04035 AKR1C7P-201ENST00000305623 895 ntBASIC21.21■□□□□ 0.99
HMGCRP04035 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HMGCRP04035 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC21.21■□□□□ 0.99
HMGCRP04035 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC21.21■□□□□ 0.99
HMGCRP04035 KRT18P13-201ENST00000400056 1290 ntBASIC21.21■□□□□ 0.99
HMGCRP04035 RPP21-221ENST00000428040 594 ntTSL 2 BASIC21.21■□□□□ 0.99
HMGCRP04035 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC21.21■□□□□ 0.99
HMGCRP04035 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HMGCRP04035 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HMGCRP04035 AP003733.1-201ENST00000491725 852 ntBASIC21.21■□□□□ 0.99
HMGCRP04035 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HMGCRP04035 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
HMGCRP04035 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC21.21■□□□□ 0.99
HMGCRP04035 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HMGCRP04035 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC21.21■□□□□ 0.99
HMGCRP04035 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC21.21■□□□□ 0.99
HMGCRP04035 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
HMGCRP04035 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
HMGCRP04035 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
HMGCRP04035 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HMGCRP04035 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
HMGCRP04035 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
HMGCRP04035 GAS2L1P1-201ENST00000420145 1480 ntBASIC21.2■□□□□ 0.98
HMGCRP04035 GOLGA6L5P-202ENST00000515341 1828 ntBASIC21.2■□□□□ 0.98
HMGCRP04035 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC21.2■□□□□ 0.98
HMGCRP04035 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
HMGCRP04035 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HMGCRP04035 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HMGCRP04035 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC21.2■□□□□ 0.98
HMGCRP04035 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
HMGCRP04035 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC21.2■□□□□ 0.98
HMGCRP04035 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HMGCRP04035 SAPCD2P3-201ENST00000455031 850 ntBASIC21.2■□□□□ 0.98
HMGCRP04035 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
HMGCRP04035 ABR-204ENST00000543210 1049 ntTSL 2 BASIC21.2■□□□□ 0.98
HMGCRP04035 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC21.2■□□□□ 0.98
HMGCRP04035 NME4-212ENST00000621774 904 ntTSL 3 BASIC21.2■□□□□ 0.98
HMGCRP04035 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC21.2■□□□□ 0.98
HMGCRP04035 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
HMGCRP04035 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HMGCRP04035 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC21.2■□□□□ 0.98
HMGCRP04035 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HMGCRP04035 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HMGCRP04035 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms