Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20.24■□□□□ 0.83
HLA-DRAP01903 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
HLA-DRAP01903 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.24■□□□□ 0.83
HLA-DRAP01903 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC20.24■□□□□ 0.83
HLA-DRAP01903 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC20.24■□□□□ 0.83
HLA-DRAP01903 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
HLA-DRAP01903 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC20.23■□□□□ 0.83
HLA-DRAP01903 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HLA-DRAP01903 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC20.23■□□□□ 0.83
HLA-DRAP01903 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20.23■□□□□ 0.83
HLA-DRAP01903 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC20.23■□□□□ 0.83
HLA-DRAP01903 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
HLA-DRAP01903 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC20.23■□□□□ 0.83
HLA-DRAP01903 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC20.23■□□□□ 0.83
HLA-DRAP01903 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC20.23■□□□□ 0.83
HLA-DRAP01903 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.23■□□□□ 0.83
HLA-DRAP01903 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
HLA-DRAP01903 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HLA-DRAP01903 AC073912.3-201ENST00000624414 853 ntBASIC20.23■□□□□ 0.83
HLA-DRAP01903 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HLA-DRAP01903 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.23■□□□□ 0.83
HLA-DRAP01903 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC20.23■□□□□ 0.83
HLA-DRAP01903 SNAI3-AS1-205ENST00000568633 2096 ntBASIC20.23■□□□□ 0.83
HLA-DRAP01903 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
HLA-DRAP01903 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.23■□□□□ 0.83
HLA-DRAP01903 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
HLA-DRAP01903 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC20.23■□□□□ 0.83
HLA-DRAP01903 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HLA-DRAP01903 LINC01568-207ENST00000641790 1380 ntBASIC20.22■□□□□ 0.83
HLA-DRAP01903 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HLA-DRAP01903 AC008556.1-201ENST00000610908 2040 ntBASIC20.22■□□□□ 0.83
HLA-DRAP01903 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
HLA-DRAP01903 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HLA-DRAP01903 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
HLA-DRAP01903 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HLA-DRAP01903 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
HLA-DRAP01903 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC20.22■□□□□ 0.83
HLA-DRAP01903 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HLA-DRAP01903 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HLA-DRAP01903 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HLA-DRAP01903 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HLA-DRAP01903 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC20.22■□□□□ 0.83
HLA-DRAP01903 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HLA-DRAP01903 MCCD1P1-208ENST00000445732 328 ntBASIC20.22■□□□□ 0.83
HLA-DRAP01903 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.22■□□□□ 0.83
HLA-DRAP01903 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC20.22■□□□□ 0.83
HLA-DRAP01903 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.22■□□□□ 0.83
HLA-DRAP01903 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
HLA-DRAP01903 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.22■□□□□ 0.83
HLA-DRAP01903 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HLA-DRAP01903 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HLA-DRAP01903 AL109659.2-201ENST00000606809 1674 ntBASIC20.22■□□□□ 0.83
HLA-DRAP01903 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20.22■□□□□ 0.83
HLA-DRAP01903 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC20.21■□□□□ 0.83
HLA-DRAP01903 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HLA-DRAP01903 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HLA-DRAP01903 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC20.21■□□□□ 0.83
HLA-DRAP01903 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
HLA-DRAP01903 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
HLA-DRAP01903 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
HLA-DRAP01903 ENSA-205ENST00000361532 792 ntTSL 2 BASIC20.21■□□□□ 0.83
HLA-DRAP01903 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HLA-DRAP01903 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC20.21■□□□□ 0.83
HLA-DRAP01903 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.21■□□□□ 0.83
HLA-DRAP01903 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HLA-DRAP01903 ECEL1P2-202ENST00000465689 757 ntBASIC20.21■□□□□ 0.83
HLA-DRAP01903 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HLA-DRAP01903 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
HLA-DRAP01903 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
HLA-DRAP01903 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.21■□□□□ 0.83
HLA-DRAP01903 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC20.21■□□□□ 0.83
HLA-DRAP01903 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HLA-DRAP01903 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
HLA-DRAP01903 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
HLA-DRAP01903 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HLA-DRAP01903 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC20.21■□□□□ 0.83
HLA-DRAP01903 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.21■□□□□ 0.83
HLA-DRAP01903 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HLA-DRAP01903 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HLA-DRAP01903 COBL-210ENST00000632460 1941 ntTSL 5 BASIC20.21■□□□□ 0.83
HLA-DRAP01903 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HLA-DRAP01903 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
HLA-DRAP01903 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HLA-DRAP01903 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HLA-DRAP01903 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HLA-DRAP01903 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.2■□□□□ 0.82
HLA-DRAP01903 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC20.2■□□□□ 0.82
HLA-DRAP01903 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.2■□□□□ 0.82
HLA-DRAP01903 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HLA-DRAP01903 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HLA-DRAP01903 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HLA-DRAP01903 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
HLA-DRAP01903 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HLA-DRAP01903 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
HLA-DRAP01903 AC128688.1-201ENST00000487626 519 ntBASIC20.2■□□□□ 0.82
HLA-DRAP01903 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC20.2■□□□□ 0.82
HLA-DRAP01903 FAM87A-204ENST00000613235 858 ntBASIC20.2■□□□□ 0.82
HLA-DRAP01903 AC010653.2-201ENST00000623505 997 ntBASIC20.2■□□□□ 0.82
HLA-DRAP01903 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.2■□□□□ 0.82
HLA-DRAP01903 Z98044.1-201ENST00000632503 1764 ntBASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms