Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
PCF11O94913 PPIH-202ENST00000372549 327 ntTSL 3 BASIC29.36■■■□□ 2.29
PCF11O94913 MIR662-201ENST00000384847 95 ntBASIC29.36■■■□□ 2.29
PCF11O94913 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC29.36■■■□□ 2.29
PCF11O94913 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC29.36■■■□□ 2.29
PCF11O94913 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC29.36■■■□□ 2.29
PCF11O94913 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC29.36■■■□□ 2.29
PCF11O94913 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
PCF11O94913 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC29.36■■■□□ 2.29
PCF11O94913 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
PCF11O94913 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC29.35■■■□□ 2.29
PCF11O94913 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
PCF11O94913 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
PCF11O94913 AC004870.1-201ENST00000315132 882 ntBASIC29.35■■■□□ 2.29
PCF11O94913 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC29.35■■■□□ 2.29
PCF11O94913 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
PCF11O94913 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC29.35■■■□□ 2.29
PCF11O94913 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
PCF11O94913 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC29.35■■■□□ 2.29
PCF11O94913 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC29.35■■■□□ 2.29
PCF11O94913 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
PCF11O94913 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
PCF11O94913 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
PCF11O94913 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC29.35■■■□□ 2.29
PCF11O94913 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
PCF11O94913 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC29.35■■■□□ 2.29
PCF11O94913 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC29.35■■■□□ 2.29
PCF11O94913 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC29.35■■■□□ 2.29
PCF11O94913 PCDHAC2-203ENST00000615316 3011 ntBASIC29.35■■■□□ 2.29
PCF11O94913 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC29.35■■■□□ 2.29
PCF11O94913 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC29.35■■■□□ 2.29
PCF11O94913 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC29.35■■■□□ 2.29
PCF11O94913 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC29.35■■■□□ 2.29
PCF11O94913 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC29.35■■■□□ 2.29
PCF11O94913 CIB2-208ENST00000560618 804 ntTSL 2 BASIC29.35■■■□□ 2.29
PCF11O94913 AP002414.4-201ENST00000589764 1148 ntBASIC29.35■■■□□ 2.29
PCF11O94913 AC011498.5-201ENST00000592027 486 ntBASIC29.35■■■□□ 2.29
PCF11O94913 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC29.35■■■□□ 2.29
PCF11O94913 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
PCF11O94913 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC29.35■■■□□ 2.29
PCF11O94913 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC29.35■■■□□ 2.29
PCF11O94913 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC29.35■■■□□ 2.29
PCF11O94913 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
PCF11O94913 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
PCF11O94913 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
PCF11O94913 HEIH-201ENST00000623091 1652 ntBASIC29.34■■■□□ 2.29
PCF11O94913 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC29.34■■■□□ 2.29
PCF11O94913 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
PCF11O94913 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC29.34■■■□□ 2.29
PCF11O94913 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC29.34■■■□□ 2.29
PCF11O94913 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC29.34■■■□□ 2.29
PCF11O94913 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
PCF11O94913 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC29.34■■■□□ 2.29
PCF11O94913 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC29.34■■■□□ 2.29
PCF11O94913 BX276092.5-203ENST00000456199 560 ntBASIC29.34■■■□□ 2.29
PCF11O94913 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC29.34■■■□□ 2.29
PCF11O94913 SDHD-206ENST00000528182 754 ntTSL 3 BASIC29.34■■■□□ 2.29
PCF11O94913 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC29.34■■■□□ 2.29
PCF11O94913 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
PCF11O94913 KRT8P7-201ENST00000533003 1432 ntBASIC29.33■■■□□ 2.29
PCF11O94913 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC29.33■■■□□ 2.29
PCF11O94913 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC29.33■■■□□ 2.29
PCF11O94913 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC29.33■■■□□ 2.29
PCF11O94913 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
PCF11O94913 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC29.33■■■□□ 2.29
PCF11O94913 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC29.33■■■□□ 2.29
PCF11O94913 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
PCF11O94913 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC29.33■■■□□ 2.29
PCF11O94913 KRT8P26-201ENST00000534154 1276 ntBASIC29.33■■■□□ 2.29
PCF11O94913 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC29.33■■■□□ 2.29
PCF11O94913 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
PCF11O94913 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC29.33■■■□□ 2.29
PCF11O94913 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC29.33■■■□□ 2.29
PCF11O94913 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC29.33■■■□□ 2.29
PCF11O94913 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
PCF11O94913 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC29.33■■■□□ 2.29
PCF11O94913 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
PCF11O94913 AC034236.2-201ENST00000606662 1610 ntBASIC29.33■■■□□ 2.29
PCF11O94913 Z98044.1-201ENST00000632503 1764 ntBASIC29.32■■■□□ 2.28
PCF11O94913 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC29.32■■■□□ 2.28
PCF11O94913 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
PCF11O94913 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC29.32■■■□□ 2.28
PCF11O94913 SKP2-204ENST00000508514 821 ntTSL 3 BASIC29.32■■■□□ 2.28
PCF11O94913 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC29.32■■■□□ 2.28
PCF11O94913 AL390719.2-201ENST00000606993 987 ntBASIC29.32■■■□□ 2.28
PCF11O94913 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC29.32■■■□□ 2.28
PCF11O94913 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
PCF11O94913 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC29.32■■■□□ 2.28
PCF11O94913 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC29.32■■■□□ 2.28
PCF11O94913 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
PCF11O94913 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
PCF11O94913 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC29.32■■■□□ 2.28
PCF11O94913 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC29.31■■■□□ 2.28
PCF11O94913 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
PCF11O94913 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
PCF11O94913 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
PCF11O94913 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC29.31■■■□□ 2.28
PCF11O94913 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC29.31■■■□□ 2.28
PCF11O94913 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
PCF11O94913 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC29.31■■■□□ 2.28
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms