Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 TSPY7P-201ENST00000431358 1114 ntBASIC21.89■■□□□ 1.09
CDKL5O76039 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC21.89■■□□□ 1.09
CDKL5O76039 CA15P1-201ENST00000481698 905 ntBASIC21.89■■□□□ 1.09
CDKL5O76039 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC21.89■■□□□ 1.09
CDKL5O76039 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
CDKL5O76039 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC21.89■■□□□ 1.09
CDKL5O76039 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
CDKL5O76039 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC21.89■■□□□ 1.09
CDKL5O76039 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CDKL5O76039 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CDKL5O76039 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CDKL5O76039 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDKL5O76039 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDKL5O76039 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC21.88■■□□□ 1.09
CDKL5O76039 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDKL5O76039 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CDKL5O76039 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC21.88■■□□□ 1.09
CDKL5O76039 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDKL5O76039 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC21.88■■□□□ 1.09
CDKL5O76039 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC21.88■■□□□ 1.09
CDKL5O76039 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC21.88■■□□□ 1.09
CDKL5O76039 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CDKL5O76039 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
CDKL5O76039 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC21.88■■□□□ 1.09
CDKL5O76039 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
CDKL5O76039 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDKL5O76039 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDKL5O76039 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDKL5O76039 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CDKL5O76039 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
CDKL5O76039 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDKL5O76039 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
CDKL5O76039 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CDKL5O76039 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC21.88■■□□□ 1.09
CDKL5O76039 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDKL5O76039 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC21.87■■□□□ 1.09
CDKL5O76039 KRT17P2-201ENST00000300992 1314 ntBASIC21.87■■□□□ 1.09
CDKL5O76039 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CDKL5O76039 RCC2P3-201ENST00000418112 1537 ntBASIC21.87■■□□□ 1.09
CDKL5O76039 MTMR9LP-203ENST00000426597 1545 ntBASIC21.87■■□□□ 1.09
CDKL5O76039 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC21.87■■□□□ 1.09
CDKL5O76039 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CDKL5O76039 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
CDKL5O76039 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
CDKL5O76039 FDX2-206ENST00000492239 773 ntTSL 2 BASIC21.87■■□□□ 1.09
CDKL5O76039 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC21.87■■□□□ 1.09
CDKL5O76039 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC21.87■■□□□ 1.09
CDKL5O76039 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
CDKL5O76039 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC21.87■■□□□ 1.09
CDKL5O76039 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
CDKL5O76039 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDKL5O76039 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC21.87■■□□□ 1.09
CDKL5O76039 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC21.87■■□□□ 1.09
CDKL5O76039 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDKL5O76039 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
CDKL5O76039 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC21.87■■□□□ 1.09
CDKL5O76039 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CDKL5O76039 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC21.86■■□□□ 1.09
CDKL5O76039 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC21.86■■□□□ 1.09
CDKL5O76039 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
CDKL5O76039 SNAI3-AS1-205ENST00000568633 2096 ntBASIC21.86■■□□□ 1.09
CDKL5O76039 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CDKL5O76039 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CDKL5O76039 NFYC-AS1-201ENST00000606277 1687 ntBASIC21.86■■□□□ 1.09
CDKL5O76039 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
CDKL5O76039 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CDKL5O76039 RBM17P1-201ENST00000453646 1190 ntBASIC21.86■■□□□ 1.09
CDKL5O76039 SNORA78-201ENST00000459373 127 ntBASIC21.86■■□□□ 1.09
CDKL5O76039 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
CDKL5O76039 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC21.86■■□□□ 1.09
CDKL5O76039 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC21.86■■□□□ 1.09
CDKL5O76039 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CDKL5O76039 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CDKL5O76039 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CDKL5O76039 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CDKL5O76039 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
CDKL5O76039 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CDKL5O76039 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
CDKL5O76039 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC21.85■■□□□ 1.09
CDKL5O76039 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDKL5O76039 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDKL5O76039 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDKL5O76039 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDKL5O76039 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDKL5O76039 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDKL5O76039 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDKL5O76039 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDKL5O76039 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDKL5O76039 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDKL5O76039 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDKL5O76039 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDKL5O76039 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC21.85■■□□□ 1.09
CDKL5O76039 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDKL5O76039 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC21.85■■□□□ 1.09
CDKL5O76039 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CDKL5O76039 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
CDKL5O76039 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDKL5O76039 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDKL5O76039 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDKL5O76039 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms