Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC24.15■■□□□ 1.46
PTCD1O75127 LINC00265-3P-201ENST00000447588 903 ntBASIC24.15■■□□□ 1.46
PTCD1O75127 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC24.15■■□□□ 1.46
PTCD1O75127 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC24.15■■□□□ 1.46
PTCD1O75127 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC24.15■■□□□ 1.46
PTCD1O75127 IFNL4P1-201ENST00000607083 540 ntBASIC24.15■■□□□ 1.46
PTCD1O75127 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC24.15■■□□□ 1.46
PTCD1O75127 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PTCD1O75127 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC24.15■■□□□ 1.46
PTCD1O75127 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PTCD1O75127 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
PTCD1O75127 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
PTCD1O75127 ME2-218ENST00000640965 2476 ntTSL 5 BASIC24.15■■□□□ 1.46
PTCD1O75127 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC24.14■■□□□ 1.46
PTCD1O75127 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
PTCD1O75127 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC24.14■■□□□ 1.46
PTCD1O75127 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.46
PTCD1O75127 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.46
PTCD1O75127 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.46
PTCD1O75127 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC24.14■■□□□ 1.46
PTCD1O75127 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
PTCD1O75127 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
PTCD1O75127 PVRIG2P-201ENST00000435460 978 ntBASIC24.14■■□□□ 1.45
PTCD1O75127 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC24.14■■□□□ 1.45
PTCD1O75127 EMBP1-201ENST00000458200 901 ntBASIC24.14■■□□□ 1.45
PTCD1O75127 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC24.14■■□□□ 1.45
PTCD1O75127 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC24.14■■□□□ 1.45
PTCD1O75127 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
PTCD1O75127 PNN-202ENST00000553331 656 ntTSL 3 BASIC24.14■■□□□ 1.45
PTCD1O75127 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
PTCD1O75127 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC24.14■■□□□ 1.45
PTCD1O75127 AC010240.3-201ENST00000607688 395 ntBASIC24.14■■□□□ 1.45
PTCD1O75127 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC24.14■■□□□ 1.45
PTCD1O75127 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
PTCD1O75127 Z83836.1-201ENST00000624605 1642 ntBASIC24.13■■□□□ 1.45
PTCD1O75127 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
PTCD1O75127 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
PTCD1O75127 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
PTCD1O75127 KRT8P10-201ENST00000450021 1447 ntBASIC24.13■■□□□ 1.45
PTCD1O75127 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
PTCD1O75127 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PTCD1O75127 AP000347.1-202ENST00000435868 847 ntBASIC24.13■■□□□ 1.45
PTCD1O75127 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC24.13■■□□□ 1.45
PTCD1O75127 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
PTCD1O75127 KRT17P6-201ENST00000453795 1220 ntBASIC24.13■■□□□ 1.45
PTCD1O75127 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
PTCD1O75127 LITAF-220ENST00000620789 692 ntTSL 5 BASIC24.13■■□□□ 1.45
PTCD1O75127 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
PTCD1O75127 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC24.13■■□□□ 1.45
PTCD1O75127 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PTCD1O75127 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PTCD1O75127 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC24.13■■□□□ 1.45
PTCD1O75127 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PTCD1O75127 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
PTCD1O75127 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
PTCD1O75127 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC24.13■■□□□ 1.45
PTCD1O75127 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
PTCD1O75127 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
PTCD1O75127 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
PTCD1O75127 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC24.12■■□□□ 1.45
PTCD1O75127 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
PTCD1O75127 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PTCD1O75127 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC24.12■■□□□ 1.45
PTCD1O75127 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC24.12■■□□□ 1.45
PTCD1O75127 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PTCD1O75127 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
PTCD1O75127 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
PTCD1O75127 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
PTCD1O75127 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PTCD1O75127 DRAXINP1-201ENST00000437611 948 ntBASIC24.12■■□□□ 1.45
PTCD1O75127 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
PTCD1O75127 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC24.12■■□□□ 1.45
PTCD1O75127 AC104390.1-201ENST00000555663 520 ntBASIC24.12■■□□□ 1.45
PTCD1O75127 CIB2-208ENST00000560618 804 ntTSL 2 BASIC24.12■■□□□ 1.45
PTCD1O75127 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC24.12■■□□□ 1.45
PTCD1O75127 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC24.12■■□□□ 1.45
PTCD1O75127 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PTCD1O75127 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PTCD1O75127 KATNBL1P6-202ENST00000562413 1466 ntBASIC24.12■■□□□ 1.45
PTCD1O75127 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC24.12■■□□□ 1.45
PTCD1O75127 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PTCD1O75127 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
PTCD1O75127 UBC-206ENST00000538617 1303 ntTSL 5 BASIC24.11■■□□□ 1.45
PTCD1O75127 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC24.11■■□□□ 1.45
PTCD1O75127 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC24.11■■□□□ 1.45
PTCD1O75127 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PTCD1O75127 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC24.11■■□□□ 1.45
PTCD1O75127 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC24.11■■□□□ 1.45
PTCD1O75127 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PTCD1O75127 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC24.11■■□□□ 1.45
PTCD1O75127 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
PTCD1O75127 TSPY19P-201ENST00000418461 509 ntBASIC24.11■■□□□ 1.45
PTCD1O75127 TSPY18P-201ENST00000441642 509 ntBASIC24.11■■□□□ 1.45
PTCD1O75127 FAAHP1-202ENST00000446499 1238 ntBASIC24.11■■□□□ 1.45
PTCD1O75127 TOB2P1-201ENST00000469761 992 ntBASIC24.11■■□□□ 1.45
PTCD1O75127 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC24.11■■□□□ 1.45
PTCD1O75127 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC24.11■■□□□ 1.45
PTCD1O75127 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC24.11■■□□□ 1.45
PTCD1O75127 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC24.11■■□□□ 1.45
PTCD1O75127 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms