Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SCN2BO60939 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.87■□□□□ 0.45
SCN2BO60939 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SCN2BO60939 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SCN2BO60939 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SCN2BO60939 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SCN2BO60939 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.87■□□□□ 0.45
SCN2BO60939 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
SCN2BO60939 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SCN2BO60939 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.87■□□□□ 0.45
SCN2BO60939 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.87■□□□□ 0.45
SCN2BO60939 AC239809.2-201ENST00000415381 517 ntBASIC17.87■□□□□ 0.45
SCN2BO60939 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.87■□□□□ 0.45
SCN2BO60939 RN7SL471P-201ENST00000580476 299 ntBASIC17.87■□□□□ 0.45
SCN2BO60939 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC17.87■□□□□ 0.45
SCN2BO60939 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SCN2BO60939 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SCN2BO60939 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
SCN2BO60939 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
SCN2BO60939 KRT8P11-201ENST00000409686 1436 ntBASIC17.87■□□□□ 0.45
SCN2BO60939 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.87■□□□□ 0.45
SCN2BO60939 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
SCN2BO60939 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SCN2BO60939 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SCN2BO60939 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
SCN2BO60939 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SCN2BO60939 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SCN2BO60939 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.86■□□□□ 0.45
SCN2BO60939 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
SCN2BO60939 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
SCN2BO60939 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SCN2BO60939 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
SCN2BO60939 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
SCN2BO60939 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SCN2BO60939 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
SCN2BO60939 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
SCN2BO60939 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SCN2BO60939 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SCN2BO60939 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.86■□□□□ 0.45
SCN2BO60939 ESRRAP1-201ENST00000400596 1257 ntBASIC17.86■□□□□ 0.45
SCN2BO60939 AC004980.1-204ENST00000429707 299 ntBASIC17.86■□□□□ 0.45
SCN2BO60939 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.86■□□□□ 0.45
SCN2BO60939 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.86■□□□□ 0.45
SCN2BO60939 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.86■□□□□ 0.45
SCN2BO60939 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.86■□□□□ 0.45
SCN2BO60939 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.86■□□□□ 0.45
SCN2BO60939 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.86■□□□□ 0.45
SCN2BO60939 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SCN2BO60939 AC090340.1-201ENST00000620778 4980 ntBASIC17.86■□□□□ 0.45
SCN2BO60939 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.86■□□□□ 0.45
SCN2BO60939 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
SCN2BO60939 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SCN2BO60939 AC073592.3-201ENST00000625118 1834 ntBASIC17.86■□□□□ 0.45
SCN2BO60939 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SCN2BO60939 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SCN2BO60939 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
SCN2BO60939 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SCN2BO60939 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.86■□□□□ 0.45
SCN2BO60939 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SCN2BO60939 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SCN2BO60939 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SCN2BO60939 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
SCN2BO60939 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.85■□□□□ 0.45
SCN2BO60939 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.85■□□□□ 0.45
SCN2BO60939 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
SCN2BO60939 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SCN2BO60939 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SCN2BO60939 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
SCN2BO60939 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SCN2BO60939 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
SCN2BO60939 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SCN2BO60939 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC17.85■□□□□ 0.45
SCN2BO60939 MTMR9LP-203ENST00000426597 1545 ntBASIC17.85■□□□□ 0.45
SCN2BO60939 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SCN2BO60939 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.85■□□□□ 0.45
SCN2BO60939 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SCN2BO60939 ADM-205ENST00000528544 586 ntTSL 2 BASIC17.85■□□□□ 0.45
SCN2BO60939 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.85■□□□□ 0.45
SCN2BO60939 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.85■□□□□ 0.45
SCN2BO60939 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
SCN2BO60939 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.85■□□□□ 0.45
SCN2BO60939 AC110285.5-201ENST00000611501 352 ntBASIC17.85■□□□□ 0.45
SCN2BO60939 TBCB-214ENST00000629269 413 ntTSL 5 BASIC17.85■□□□□ 0.45
SCN2BO60939 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.85■□□□□ 0.45
SCN2BO60939 AC068587.9-201ENST00000641814 219 ntBASIC17.85■□□□□ 0.45
SCN2BO60939 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SCN2BO60939 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SCN2BO60939 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SCN2BO60939 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
SCN2BO60939 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
SCN2BO60939 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SCN2BO60939 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SCN2BO60939 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SCN2BO60939 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SCN2BO60939 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.84■□□□□ 0.45
SCN2BO60939 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SCN2BO60939 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SCN2BO60939 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
SCN2BO60939 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SCN2BO60939 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms