Protein–RNA interactions for Protein: O60548

FOXD2, Forkhead box protein D2, humanhuman

Predicted RBP Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD2O60548 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
FOXD2O60548 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
FOXD2O60548 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
FOXD2O60548 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.92■□□□□ 0.62
FOXD2O60548 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.92■□□□□ 0.62
FOXD2O60548 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.92■□□□□ 0.62
FOXD2O60548 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.92■□□□□ 0.62
FOXD2O60548 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
FOXD2O60548 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
FOXD2O60548 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
FOXD2O60548 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
FOXD2O60548 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
FOXD2O60548 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
FOXD2O60548 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.92■□□□□ 0.62
FOXD2O60548 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
FOXD2O60548 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.92■□□□□ 0.62
FOXD2O60548 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
FOXD2O60548 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
FOXD2O60548 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
FOXD2O60548 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.91■□□□□ 0.62
FOXD2O60548 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
FOXD2O60548 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
FOXD2O60548 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.91■□□□□ 0.62
FOXD2O60548 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.91■□□□□ 0.62
FOXD2O60548 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
FOXD2O60548 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.91■□□□□ 0.62
FOXD2O60548 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
FOXD2O60548 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
FOXD2O60548 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
FOXD2O60548 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.91■□□□□ 0.62
FOXD2O60548 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.91■□□□□ 0.62
FOXD2O60548 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.91■□□□□ 0.62
FOXD2O60548 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
FOXD2O60548 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
FOXD2O60548 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.91■□□□□ 0.62
FOXD2O60548 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.91■□□□□ 0.62
FOXD2O60548 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
FOXD2O60548 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.91■□□□□ 0.62
FOXD2O60548 IFNL4P1-201ENST00000607083 540 ntBASIC18.91■□□□□ 0.62
FOXD2O60548 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.91■□□□□ 0.62
FOXD2O60548 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
FOXD2O60548 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.91■□□□□ 0.62
FOXD2O60548 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
FOXD2O60548 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.91■□□□□ 0.62
FOXD2O60548 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
FOXD2O60548 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.91■□□□□ 0.62
FOXD2O60548 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
FOXD2O60548 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.91■□□□□ 0.62
FOXD2O60548 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.91■□□□□ 0.62
FOXD2O60548 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.91■□□□□ 0.62
FOXD2O60548 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.91■□□□□ 0.62
FOXD2O60548 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
FOXD2O60548 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.9■□□□□ 0.62
FOXD2O60548 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.9■□□□□ 0.62
FOXD2O60548 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
FOXD2O60548 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
FOXD2O60548 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
FOXD2O60548 TNXA-203ENST00000507684 2038 ntBASIC18.9■□□□□ 0.62
FOXD2O60548 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
FOXD2O60548 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
FOXD2O60548 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.9■□□□□ 0.62
FOXD2O60548 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
FOXD2O60548 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
FOXD2O60548 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
FOXD2O60548 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.9■□□□□ 0.62
FOXD2O60548 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
FOXD2O60548 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
FOXD2O60548 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.9■□□□□ 0.62
FOXD2O60548 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.9■□□□□ 0.62
FOXD2O60548 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
FOXD2O60548 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
FOXD2O60548 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
FOXD2O60548 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.9■□□□□ 0.62
FOXD2O60548 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
FOXD2O60548 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.9■□□□□ 0.62
FOXD2O60548 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.9■□□□□ 0.62
FOXD2O60548 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
FOXD2O60548 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
FOXD2O60548 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
FOXD2O60548 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
FOXD2O60548 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
FOXD2O60548 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
FOXD2O60548 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
FOXD2O60548 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
FOXD2O60548 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
FOXD2O60548 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.89■□□□□ 0.61
FOXD2O60548 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
FOXD2O60548 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
FOXD2O60548 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.89■□□□□ 0.61
FOXD2O60548 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
FOXD2O60548 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.89■□□□□ 0.61
FOXD2O60548 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
FOXD2O60548 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
FOXD2O60548 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
FOXD2O60548 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC18.89■□□□□ 0.61
FOXD2O60548 SPDYE15P-201ENST00000424157 909 ntBASIC18.89■□□□□ 0.61
FOXD2O60548 UNC93B7-201ENST00000509439 705 ntBASIC18.89■□□□□ 0.61
FOXD2O60548 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
FOXD2O60548 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.89■□□□□ 0.61
FOXD2O60548 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms