Protein–RNA interactions for Protein: O60506

SYNCRIP, Heterogeneous nuclear ribonucleoprotein Q, humanhuman

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIPO60506 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.23■□□□□ 0.67
SYNCRIPO60506 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SYNCRIPO60506 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SYNCRIPO60506 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SYNCRIPO60506 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SYNCRIPO60506 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.22■□□□□ 0.67
SYNCRIPO60506 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SYNCRIPO60506 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
SYNCRIPO60506 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SYNCRIPO60506 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.22■□□□□ 0.67
SYNCRIPO60506 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SYNCRIPO60506 SDHAP1-207ENST00000440850 2000 ntBASIC19.22■□□□□ 0.67
SYNCRIPO60506 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SYNCRIPO60506 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
SYNCRIPO60506 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.22■□□□□ 0.67
SYNCRIPO60506 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SYNCRIPO60506 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.22■□□□□ 0.67
SYNCRIPO60506 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.22■□□□□ 0.67
SYNCRIPO60506 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.22■□□□□ 0.67
SYNCRIPO60506 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.22■□□□□ 0.67
SYNCRIPO60506 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.22■□□□□ 0.67
SYNCRIPO60506 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.22■□□□□ 0.67
SYNCRIPO60506 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.22■□□□□ 0.67
SYNCRIPO60506 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.22■□□□□ 0.67
SYNCRIPO60506 AL121956.5-201ENST00000625261 221 ntBASIC19.22■□□□□ 0.67
SYNCRIPO60506 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SYNCRIPO60506 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SYNCRIPO60506 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SYNCRIPO60506 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SYNCRIPO60506 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
SYNCRIPO60506 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
SYNCRIPO60506 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SYNCRIPO60506 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
SYNCRIPO60506 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SYNCRIPO60506 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SYNCRIPO60506 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SYNCRIPO60506 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SYNCRIPO60506 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SYNCRIPO60506 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
SYNCRIPO60506 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SYNCRIPO60506 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SYNCRIPO60506 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SYNCRIPO60506 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
SYNCRIPO60506 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SYNCRIPO60506 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.21■□□□□ 0.67
SYNCRIPO60506 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SYNCRIPO60506 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SYNCRIPO60506 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.67
SYNCRIPO60506 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.21■□□□□ 0.67
SYNCRIPO60506 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SYNCRIPO60506 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.21■□□□□ 0.67
SYNCRIPO60506 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.21■□□□□ 0.67
SYNCRIPO60506 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SYNCRIPO60506 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SYNCRIPO60506 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.21■□□□□ 0.67
SYNCRIPO60506 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.21■□□□□ 0.67
SYNCRIPO60506 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SYNCRIPO60506 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.21■□□□□ 0.67
SYNCRIPO60506 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SYNCRIPO60506 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SYNCRIPO60506 AC008622.2-201ENST00000617006 1229 ntBASIC19.21■□□□□ 0.67
SYNCRIPO60506 AP000550.4-202ENST00000639755 178 ntBASIC19.21■□□□□ 0.67
SYNCRIPO60506 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SYNCRIPO60506 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
SYNCRIPO60506 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.21■□□□□ 0.67
SYNCRIPO60506 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
SYNCRIPO60506 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SYNCRIPO60506 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.2■□□□□ 0.66
SYNCRIPO60506 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.2■□□□□ 0.66
SYNCRIPO60506 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SYNCRIPO60506 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SYNCRIPO60506 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.2■□□□□ 0.66
SYNCRIPO60506 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SYNCRIPO60506 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SYNCRIPO60506 TREX1-205ENST00000625293 1783 ntBASIC19.2■□□□□ 0.66
SYNCRIPO60506 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SYNCRIPO60506 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.2■□□□□ 0.66
SYNCRIPO60506 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SYNCRIPO60506 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SYNCRIPO60506 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.2■□□□□ 0.66
SYNCRIPO60506 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.2■□□□□ 0.66
SYNCRIPO60506 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SYNCRIPO60506 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SYNCRIPO60506 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.2■□□□□ 0.66
SYNCRIPO60506 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.2■□□□□ 0.66
SYNCRIPO60506 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SYNCRIPO60506 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SYNCRIPO60506 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SYNCRIPO60506 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SYNCRIPO60506 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SYNCRIPO60506 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SYNCRIPO60506 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SYNCRIPO60506 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SYNCRIPO60506 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SYNCRIPO60506 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SYNCRIPO60506 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
SYNCRIPO60506 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SYNCRIPO60506 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SYNCRIPO60506 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SYNCRIPO60506 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms