Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAF3IP2O43734 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAF3IP2O43734 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAF3IP2O43734 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRAF3IP2O43734 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRAF3IP2O43734 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAF3IP2O43734 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAF3IP2O43734 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.78■□□□□ 0.28
TRAF3IP2O43734 HCG11-201ENST00000411553 5696 ntBASIC16.78■□□□□ 0.28
TRAF3IP2O43734 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAF3IP2O43734 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.78■□□□□ 0.28
TRAF3IP2O43734 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC16.78■□□□□ 0.28
TRAF3IP2O43734 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.78■□□□□ 0.28
TRAF3IP2O43734 AL020996.1-203ENST00000536896 2307 ntBASIC16.78■□□□□ 0.28
TRAF3IP2O43734 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAF3IP2O43734 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
TRAF3IP2O43734 PRR31-201ENST00000371629 978 ntTSL 2 BASIC16.78■□□□□ 0.28
TRAF3IP2O43734 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAF3IP2O43734 AL596275.1-201ENST00000423464 877 ntBASIC16.78■□□□□ 0.28
TRAF3IP2O43734 CA15P1-201ENST00000481698 905 ntBASIC16.78■□□□□ 0.28
TRAF3IP2O43734 FITM1-202ENST00000559294 800 ntBASIC16.78■□□□□ 0.28
TRAF3IP2O43734 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAF3IP2O43734 Z98044.1-201ENST00000632503 1764 ntBASIC16.78■□□□□ 0.28
TRAF3IP2O43734 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC16.78■□□□□ 0.28
TRAF3IP2O43734 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC16.78■□□□□ 0.28
TRAF3IP2O43734 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.78■□□□□ 0.28
TRAF3IP2O43734 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.78■□□□□ 0.28
TRAF3IP2O43734 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAF3IP2O43734 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAF3IP2O43734 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.78■□□□□ 0.28
TRAF3IP2O43734 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
TRAF3IP2O43734 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
TRAF3IP2O43734 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRAF3IP2O43734 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
TRAF3IP2O43734 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.77■□□□□ 0.28
TRAF3IP2O43734 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRAF3IP2O43734 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRAF3IP2O43734 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRAF3IP2O43734 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.77■□□□□ 0.28
TRAF3IP2O43734 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC16.77■□□□□ 0.28
TRAF3IP2O43734 AL390955.1-201ENST00000428694 934 ntBASIC16.77■□□□□ 0.28
TRAF3IP2O43734 TSPY15P-201ENST00000457163 923 ntBASIC16.77■□□□□ 0.28
TRAF3IP2O43734 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC16.77■□□□□ 0.28
TRAF3IP2O43734 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC16.77■□□□□ 0.28
TRAF3IP2O43734 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRAF3IP2O43734 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRAF3IP2O43734 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRAF3IP2O43734 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TRAF3IP2O43734 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC16.77■□□□□ 0.27
TRAF3IP2O43734 AL138781.2-201ENST00000617896 1843 ntBASIC16.77■□□□□ 0.27
TRAF3IP2O43734 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
TRAF3IP2O43734 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRAF3IP2O43734 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TRAF3IP2O43734 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.77■□□□□ 0.27
TRAF3IP2O43734 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAF3IP2O43734 MTMR9LP-203ENST00000426597 1545 ntBASIC16.76■□□□□ 0.27
TRAF3IP2O43734 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
TRAF3IP2O43734 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
TRAF3IP2O43734 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRAF3IP2O43734 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAF3IP2O43734 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.76■□□□□ 0.27
TRAF3IP2O43734 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.76■□□□□ 0.27
TRAF3IP2O43734 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
TRAF3IP2O43734 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
TRAF3IP2O43734 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRAF3IP2O43734 AC008622.2-201ENST00000617006 1229 ntBASIC16.76■□□□□ 0.27
TRAF3IP2O43734 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRAF3IP2O43734 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAF3IP2O43734 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.76■□□□□ 0.27
TRAF3IP2O43734 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
TRAF3IP2O43734 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.76■□□□□ 0.27
TRAF3IP2O43734 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
TRAF3IP2O43734 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRAF3IP2O43734 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC16.76■□□□□ 0.27
TRAF3IP2O43734 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAF3IP2O43734 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAF3IP2O43734 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.76■□□□□ 0.27
TRAF3IP2O43734 RCC2P3-201ENST00000418112 1537 ntBASIC16.75■□□□□ 0.27
TRAF3IP2O43734 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
TRAF3IP2O43734 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC16.75■□□□□ 0.27
TRAF3IP2O43734 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.75■□□□□ 0.27
TRAF3IP2O43734 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAF3IP2O43734 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAF3IP2O43734 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
TRAF3IP2O43734 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAF3IP2O43734 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAF3IP2O43734 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC16.75■□□□□ 0.27
TRAF3IP2O43734 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAF3IP2O43734 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.75■□□□□ 0.27
TRAF3IP2O43734 MIR1238-201ENST00000408483 83 ntBASIC16.75■□□□□ 0.27
TRAF3IP2O43734 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAF3IP2O43734 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC16.75■□□□□ 0.27
TRAF3IP2O43734 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC16.75■□□□□ 0.27
TRAF3IP2O43734 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC16.75■□□□□ 0.27
TRAF3IP2O43734 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC16.75■□□□□ 0.27
TRAF3IP2O43734 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.75■□□□□ 0.27
TRAF3IP2O43734 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAF3IP2O43734 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.75■□□□□ 0.27
TRAF3IP2O43734 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC16.75■□□□□ 0.27
TRAF3IP2O43734 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms