Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHMP2AO43633 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHMP2AO43633 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CHMP2AO43633 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHMP2AO43633 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CHMP2AO43633 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHMP2AO43633 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
CHMP2AO43633 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHMP2AO43633 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHMP2AO43633 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHMP2AO43633 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHMP2AO43633 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CHMP2AO43633 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHMP2AO43633 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC21.16■□□□□ 0.98
CHMP2AO43633 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHMP2AO43633 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
CHMP2AO43633 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHMP2AO43633 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CHMP2AO43633 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC21.16■□□□□ 0.98
CHMP2AO43633 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CHMP2AO43633 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHMP2AO43633 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHMP2AO43633 PHB2-202ENST00000440277 996 ntTSL 5 BASIC21.16■□□□□ 0.98
CHMP2AO43633 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC21.16■□□□□ 0.98
CHMP2AO43633 AC010331.1-201ENST00000611423 582 ntBASIC21.16■□□□□ 0.98
CHMP2AO43633 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
CHMP2AO43633 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
CHMP2AO43633 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
CHMP2AO43633 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC21.16■□□□□ 0.98
CHMP2AO43633 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHMP2AO43633 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHMP2AO43633 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHMP2AO43633 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHMP2AO43633 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHMP2AO43633 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC21.15■□□□□ 0.98
CHMP2AO43633 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
CHMP2AO43633 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CHMP2AO43633 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHMP2AO43633 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CHMP2AO43633 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHMP2AO43633 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHMP2AO43633 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CHMP2AO43633 AC117947.1-201ENST00000427448 529 ntBASIC21.15■□□□□ 0.98
CHMP2AO43633 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC21.15■□□□□ 0.98
CHMP2AO43633 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CHMP2AO43633 BX664615.1-201ENST00000443558 458 ntBASIC21.15■□□□□ 0.98
CHMP2AO43633 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CHMP2AO43633 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CHMP2AO43633 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC21.15■□□□□ 0.98
CHMP2AO43633 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC21.15■□□□□ 0.98
CHMP2AO43633 AL512604.3-201ENST00000569583 964 ntBASIC21.15■□□□□ 0.98
CHMP2AO43633 NT5C-210ENST00000582160 860 ntTSL 2 BASIC21.15■□□□□ 0.98
CHMP2AO43633 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CHMP2AO43633 AL023973.1-201ENST00000624619 620 ntBASIC21.15■□□□□ 0.98
CHMP2AO43633 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
CHMP2AO43633 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CHMP2AO43633 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC21.15■□□□□ 0.98
CHMP2AO43633 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHMP2AO43633 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC21.15■□□□□ 0.98
CHMP2AO43633 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHMP2AO43633 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
CHMP2AO43633 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHMP2AO43633 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHMP2AO43633 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
CHMP2AO43633 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CHMP2AO43633 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CHMP2AO43633 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CHMP2AO43633 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CHMP2AO43633 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC21.14■□□□□ 0.98
CHMP2AO43633 AC008556.1-201ENST00000610908 2040 ntBASIC21.14■□□□□ 0.98
CHMP2AO43633 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC21.14■□□□□ 0.98
CHMP2AO43633 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC21.14■□□□□ 0.98
CHMP2AO43633 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC21.14■□□□□ 0.98
CHMP2AO43633 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC21.14■□□□□ 0.97
CHMP2AO43633 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHMP2AO43633 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHMP2AO43633 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHMP2AO43633 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHMP2AO43633 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC21.14■□□□□ 0.97
CHMP2AO43633 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CHMP2AO43633 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
CHMP2AO43633 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CHMP2AO43633 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHMP2AO43633 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
CHMP2AO43633 AL049597.2-201ENST00000565575 961 ntBASIC21.14■□□□□ 0.97
CHMP2AO43633 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
CHMP2AO43633 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC21.14■□□□□ 0.97
CHMP2AO43633 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
CHMP2AO43633 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHMP2AO43633 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CHMP2AO43633 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CHMP2AO43633 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CHMP2AO43633 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
CHMP2AO43633 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
CHMP2AO43633 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CHMP2AO43633 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC21.13■□□□□ 0.97
CHMP2AO43633 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHMP2AO43633 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC21.13■□□□□ 0.97
CHMP2AO43633 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHMP2AO43633 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms