Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SMAD6O43541 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
SMAD6O43541 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.02■□□□□ 0.64
SMAD6O43541 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
SMAD6O43541 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SMAD6O43541 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.02■□□□□ 0.64
SMAD6O43541 FAM8A6P-201ENST00000407496 1135 ntBASIC19.02■□□□□ 0.64
SMAD6O43541 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.02■□□□□ 0.64
SMAD6O43541 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.02■□□□□ 0.64
SMAD6O43541 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SMAD6O43541 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.02■□□□□ 0.64
SMAD6O43541 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.02■□□□□ 0.64
SMAD6O43541 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.02■□□□□ 0.64
SMAD6O43541 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.02■□□□□ 0.64
SMAD6O43541 AC068587.9-201ENST00000641814 219 ntBASIC19.02■□□□□ 0.64
SMAD6O43541 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SMAD6O43541 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.02■□□□□ 0.63
SMAD6O43541 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SMAD6O43541 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.02■□□□□ 0.63
SMAD6O43541 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.02■□□□□ 0.63
SMAD6O43541 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SMAD6O43541 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SMAD6O43541 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
SMAD6O43541 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMAD6O43541 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMAD6O43541 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
SMAD6O43541 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.01■□□□□ 0.63
SMAD6O43541 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMAD6O43541 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.01■□□□□ 0.63
SMAD6O43541 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.01■□□□□ 0.63
SMAD6O43541 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMAD6O43541 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.01■□□□□ 0.63
SMAD6O43541 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMAD6O43541 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.01■□□□□ 0.63
SMAD6O43541 KRT18P38-201ENST00000449496 1282 ntBASIC19.01■□□□□ 0.63
SMAD6O43541 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.01■□□□□ 0.63
SMAD6O43541 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.01■□□□□ 0.63
SMAD6O43541 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.01■□□□□ 0.63
SMAD6O43541 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.01■□□□□ 0.63
SMAD6O43541 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.01■□□□□ 0.63
SMAD6O43541 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
SMAD6O43541 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
SMAD6O43541 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
SMAD6O43541 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMAD6O43541 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMAD6O43541 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
SMAD6O43541 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMAD6O43541 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
SMAD6O43541 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMAD6O43541 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMAD6O43541 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SMAD6O43541 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19■□□□□ 0.63
SMAD6O43541 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SMAD6O43541 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
SMAD6O43541 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19■□□□□ 0.63
SMAD6O43541 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SMAD6O43541 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SMAD6O43541 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SMAD6O43541 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SMAD6O43541 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SMAD6O43541 AP000523.1-201ENST00000398242 1049 ntBASIC19■□□□□ 0.63
SMAD6O43541 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19■□□□□ 0.63
SMAD6O43541 AC092647.4-201ENST00000457211 535 ntBASIC19■□□□□ 0.63
SMAD6O43541 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19■□□□□ 0.63
SMAD6O43541 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19■□□□□ 0.63
SMAD6O43541 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
SMAD6O43541 AC024243.1-201ENST00000609234 778 ntBASIC19■□□□□ 0.63
SMAD6O43541 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
SMAD6O43541 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
SMAD6O43541 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19■□□□□ 0.63
SMAD6O43541 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
SMAD6O43541 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SMAD6O43541 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19■□□□□ 0.63
SMAD6O43541 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19■□□□□ 0.63
SMAD6O43541 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
SMAD6O43541 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19■□□□□ 0.63
SMAD6O43541 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19■□□□□ 0.63
SMAD6O43541 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
SMAD6O43541 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
SMAD6O43541 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19■□□□□ 0.63
SMAD6O43541 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19■□□□□ 0.63
SMAD6O43541 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.99■□□□□ 0.63
SMAD6O43541 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.99■□□□□ 0.63
SMAD6O43541 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SMAD6O43541 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.99■□□□□ 0.63
SMAD6O43541 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.99■□□□□ 0.63
SMAD6O43541 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SMAD6O43541 MIR564-202ENST00000385049 94 ntBASIC18.99■□□□□ 0.63
SMAD6O43541 AL359075.1-203ENST00000462729 1002 ntBASIC18.99■□□□□ 0.63
SMAD6O43541 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.99■□□□□ 0.63
SMAD6O43541 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.99■□□□□ 0.63
SMAD6O43541 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.99■□□□□ 0.63
SMAD6O43541 MYC-208ENST00000641036 567 ntBASIC18.99■□□□□ 0.63
SMAD6O43541 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.99■□□□□ 0.63
SMAD6O43541 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.99■□□□□ 0.63
SMAD6O43541 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SMAD6O43541 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SMAD6O43541 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SMAD6O43541 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.99■□□□□ 0.63
SMAD6O43541 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms