Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC24.16■■□□□ 1.46
KCNQ3O43525 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
KCNQ3O43525 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC24.16■■□□□ 1.46
KCNQ3O43525 AP002383.4-201ENST00000442518 975 ntBASIC24.16■■□□□ 1.46
KCNQ3O43525 AC011498.5-201ENST00000592027 486 ntBASIC24.16■■□□□ 1.46
KCNQ3O43525 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC24.16■■□□□ 1.46
KCNQ3O43525 WDR6-223ENST00000627177 207 ntTSL 2 BASIC24.16■■□□□ 1.46
KCNQ3O43525 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC24.16■■□□□ 1.46
KCNQ3O43525 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC24.16■■□□□ 1.46
KCNQ3O43525 AL162741.1-201ENST00000565563 1558 ntBASIC24.16■■□□□ 1.46
KCNQ3O43525 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
KCNQ3O43525 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC24.15■■□□□ 1.46
KCNQ3O43525 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
KCNQ3O43525 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
KCNQ3O43525 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
KCNQ3O43525 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
KCNQ3O43525 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
KCNQ3O43525 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
KCNQ3O43525 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC24.15■■□□□ 1.46
KCNQ3O43525 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC24.15■■□□□ 1.46
KCNQ3O43525 RNF126P1-202ENST00000569893 925 ntBASIC24.15■■□□□ 1.46
KCNQ3O43525 MIR3180-1-201ENST00000580374 94 ntBASIC24.15■■□□□ 1.46
KCNQ3O43525 MIR3180-3-201ENST00000584616 94 ntBASIC24.15■■□□□ 1.46
KCNQ3O43525 AL136038.4-201ENST00000603606 1261 ntBASIC24.15■■□□□ 1.46
KCNQ3O43525 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
KCNQ3O43525 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
KCNQ3O43525 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
KCNQ3O43525 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
KCNQ3O43525 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
KCNQ3O43525 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
KCNQ3O43525 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC24.15■■□□□ 1.46
KCNQ3O43525 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.46
KCNQ3O43525 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC24.14■■□□□ 1.46
KCNQ3O43525 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.46
KCNQ3O43525 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
KCNQ3O43525 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
KCNQ3O43525 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
KCNQ3O43525 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
KCNQ3O43525 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC24.14■■□□□ 1.45
KCNQ3O43525 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
KCNQ3O43525 AC104390.1-201ENST00000555663 520 ntBASIC24.14■■□□□ 1.45
KCNQ3O43525 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC24.14■■□□□ 1.45
KCNQ3O43525 AC068587.9-201ENST00000641814 219 ntBASIC24.14■■□□□ 1.45
KCNQ3O43525 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
KCNQ3O43525 AC006333.2-201ENST00000607957 2099 ntBASIC24.14■■□□□ 1.45
KCNQ3O43525 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
KCNQ3O43525 AL049812.1-201ENST00000432563 2267 ntBASIC24.13■■□□□ 1.45
KCNQ3O43525 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
KCNQ3O43525 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC24.13■■□□□ 1.45
KCNQ3O43525 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC24.13■■□□□ 1.45
KCNQ3O43525 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
KCNQ3O43525 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
KCNQ3O43525 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
KCNQ3O43525 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC24.13■■□□□ 1.45
KCNQ3O43525 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC24.13■■□□□ 1.45
KCNQ3O43525 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC24.13■■□□□ 1.45
KCNQ3O43525 AC010240.3-201ENST00000607688 395 ntBASIC24.13■■□□□ 1.45
KCNQ3O43525 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC24.13■■□□□ 1.45
KCNQ3O43525 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC24.13■■□□□ 1.45
KCNQ3O43525 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC24.13■■□□□ 1.45
KCNQ3O43525 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
KCNQ3O43525 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC24.12■■□□□ 1.45
KCNQ3O43525 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC24.12■■□□□ 1.45
KCNQ3O43525 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC24.12■■□□□ 1.45
KCNQ3O43525 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
KCNQ3O43525 MIR662-201ENST00000384847 95 ntBASIC24.12■■□□□ 1.45
KCNQ3O43525 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC24.12■■□□□ 1.45
KCNQ3O43525 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC24.12■■□□□ 1.45
KCNQ3O43525 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC24.12■■□□□ 1.45
KCNQ3O43525 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
KCNQ3O43525 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC24.12■■□□□ 1.45
KCNQ3O43525 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
KCNQ3O43525 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC24.12■■□□□ 1.45
KCNQ3O43525 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC24.11■■□□□ 1.45
KCNQ3O43525 HOXB1-202ENST00000577092 1414 ntBASIC24.11■■□□□ 1.45
KCNQ3O43525 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
KCNQ3O43525 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC24.11■■□□□ 1.45
KCNQ3O43525 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC24.11■■□□□ 1.45
KCNQ3O43525 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
KCNQ3O43525 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
KCNQ3O43525 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
KCNQ3O43525 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC24.11■■□□□ 1.45
KCNQ3O43525 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC24.11■■□□□ 1.45
KCNQ3O43525 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC24.11■■□□□ 1.45
KCNQ3O43525 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC24.11■■□□□ 1.45
KCNQ3O43525 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
KCNQ3O43525 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC24.11■■□□□ 1.45
KCNQ3O43525 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC24.11■■□□□ 1.45
KCNQ3O43525 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC24.11■■□□□ 1.45
KCNQ3O43525 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC24.11■■□□□ 1.45
KCNQ3O43525 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC24.11■■□□□ 1.45
KCNQ3O43525 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC24.11■■□□□ 1.45
KCNQ3O43525 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
KCNQ3O43525 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC24.11■■□□□ 1.45
KCNQ3O43525 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
KCNQ3O43525 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC24.1■■□□□ 1.45
KCNQ3O43525 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC24.1■■□□□ 1.45
KCNQ3O43525 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
KCNQ3O43525 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC24.1■■□□□ 1.45
KCNQ3O43525 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms