Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM38O00635 SLC25A1P2-201ENST00000430693 912 ntBASIC18.93■□□□□ 0.62
TRIM38O00635 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.93■□□□□ 0.62
TRIM38O00635 AC007663.1-201ENST00000438948 1240 ntBASIC18.93■□□□□ 0.62
TRIM38O00635 CCR12P-201ENST00000446203 998 ntBASIC18.93■□□□□ 0.62
TRIM38O00635 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.93■□□□□ 0.62
TRIM38O00635 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM38O00635 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM38O00635 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM38O00635 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM38O00635 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM38O00635 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM38O00635 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM38O00635 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM38O00635 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM38O00635 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM38O00635 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM38O00635 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
TRIM38O00635 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM38O00635 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
TRIM38O00635 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
TRIM38O00635 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM38O00635 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.92■□□□□ 0.62
TRIM38O00635 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM38O00635 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM38O00635 AC005082.1-201ENST00000413042 2259 ntBASIC18.92■□□□□ 0.62
TRIM38O00635 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.92■□□□□ 0.62
TRIM38O00635 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.92■□□□□ 0.62
TRIM38O00635 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM38O00635 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
TRIM38O00635 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
TRIM38O00635 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.92■□□□□ 0.62
TRIM38O00635 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM38O00635 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.92■□□□□ 0.62
TRIM38O00635 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM38O00635 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
TRIM38O00635 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM38O00635 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.92■□□□□ 0.62
TRIM38O00635 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM38O00635 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
TRIM38O00635 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM38O00635 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
TRIM38O00635 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM38O00635 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.92■□□□□ 0.62
TRIM38O00635 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM38O00635 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM38O00635 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM38O00635 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
TRIM38O00635 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM38O00635 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.91■□□□□ 0.62
TRIM38O00635 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM38O00635 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM38O00635 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM38O00635 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.91■□□□□ 0.62
TRIM38O00635 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.91■□□□□ 0.62
TRIM38O00635 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM38O00635 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.91■□□□□ 0.62
TRIM38O00635 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM38O00635 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.91■□□□□ 0.62
TRIM38O00635 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.91■□□□□ 0.62
TRIM38O00635 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM38O00635 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.91■□□□□ 0.62
TRIM38O00635 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.91■□□□□ 0.62
TRIM38O00635 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
TRIM38O00635 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
TRIM38O00635 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.91■□□□□ 0.62
TRIM38O00635 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM38O00635 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.91■□□□□ 0.62
TRIM38O00635 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM38O00635 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM38O00635 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM38O00635 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
TRIM38O00635 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
TRIM38O00635 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM38O00635 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
TRIM38O00635 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM38O00635 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
TRIM38O00635 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.9■□□□□ 0.62
TRIM38O00635 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM38O00635 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM38O00635 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM38O00635 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM38O00635 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
TRIM38O00635 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.9■□□□□ 0.62
TRIM38O00635 RNF152P1-201ENST00000397754 604 ntBASIC18.9■□□□□ 0.62
TRIM38O00635 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.9■□□□□ 0.62
TRIM38O00635 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.9■□□□□ 0.62
TRIM38O00635 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.9■□□□□ 0.62
TRIM38O00635 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.9■□□□□ 0.62
TRIM38O00635 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.9■□□□□ 0.62
TRIM38O00635 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM38O00635 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.9■□□□□ 0.62
TRIM38O00635 AL023803.3-201ENST00000615559 522 ntBASIC18.9■□□□□ 0.62
TRIM38O00635 AL358472.4-201ENST00000633140 710 ntBASIC18.9■□□□□ 0.62
TRIM38O00635 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
TRIM38O00635 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM38O00635 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.9■□□□□ 0.62
TRIM38O00635 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM38O00635 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
TRIM38O00635 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms