Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AL499627.1-201ENST00000569373 2188 ntBASIC20.17■□□□□ 0.82
FOXN3O00409 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
FOXN3O00409 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC20.16■□□□□ 0.82
FOXN3O00409 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
FOXN3O00409 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
FOXN3O00409 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC20.16■□□□□ 0.82
FOXN3O00409 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
FOXN3O00409 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
FOXN3O00409 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
FOXN3O00409 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.16■□□□□ 0.82
FOXN3O00409 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.16■□□□□ 0.82
FOXN3O00409 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.16■□□□□ 0.82
FOXN3O00409 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.16■□□□□ 0.82
FOXN3O00409 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.16■□□□□ 0.82
FOXN3O00409 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.16■□□□□ 0.82
FOXN3O00409 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.16■□□□□ 0.82
FOXN3O00409 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.16■□□□□ 0.82
FOXN3O00409 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.16■□□□□ 0.82
FOXN3O00409 SLC25A1P4-201ENST00000567977 778 ntBASIC20.16■□□□□ 0.82
FOXN3O00409 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.16■□□□□ 0.82
FOXN3O00409 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
FOXN3O00409 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.16■□□□□ 0.82
FOXN3O00409 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
FOXN3O00409 AC096733.2-201ENST00000609937 1394 ntBASIC20.16■□□□□ 0.82
FOXN3O00409 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.16■□□□□ 0.82
FOXN3O00409 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC20.16■□□□□ 0.82
FOXN3O00409 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.16■□□□□ 0.82
FOXN3O00409 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
FOXN3O00409 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
FOXN3O00409 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.16■□□□□ 0.82
FOXN3O00409 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
FOXN3O00409 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
FOXN3O00409 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
FOXN3O00409 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC20.15■□□□□ 0.82
FOXN3O00409 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
FOXN3O00409 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
FOXN3O00409 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
FOXN3O00409 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
FOXN3O00409 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
FOXN3O00409 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
FOXN3O00409 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
FOXN3O00409 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.15■□□□□ 0.82
FOXN3O00409 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
FOXN3O00409 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
FOXN3O00409 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.15■□□□□ 0.82
FOXN3O00409 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
FOXN3O00409 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.15■□□□□ 0.82
FOXN3O00409 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.15■□□□□ 0.82
FOXN3O00409 AC008622.2-201ENST00000617006 1229 ntBASIC20.15■□□□□ 0.82
FOXN3O00409 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
FOXN3O00409 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
FOXN3O00409 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.15■□□□□ 0.82
FOXN3O00409 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
FOXN3O00409 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20.15■□□□□ 0.82
FOXN3O00409 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
FOXN3O00409 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.15■□□□□ 0.82
FOXN3O00409 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
FOXN3O00409 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC20.14■□□□□ 0.82
FOXN3O00409 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
FOXN3O00409 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC20.14■□□□□ 0.81
FOXN3O00409 AC126763.1-201ENST00000552015 2118 ntBASIC20.14■□□□□ 0.81
FOXN3O00409 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
FOXN3O00409 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.14■□□□□ 0.81
FOXN3O00409 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
FOXN3O00409 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
FOXN3O00409 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
FOXN3O00409 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
FOXN3O00409 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
FOXN3O00409 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC20.14■□□□□ 0.81
FOXN3O00409 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
FOXN3O00409 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
FOXN3O00409 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
FOXN3O00409 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
FOXN3O00409 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.14■□□□□ 0.81
FOXN3O00409 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
FOXN3O00409 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
FOXN3O00409 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
FOXN3O00409 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
FOXN3O00409 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.14■□□□□ 0.81
FOXN3O00409 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
FOXN3O00409 AL355355.2-201ENST00000442321 338 ntBASIC20.14■□□□□ 0.81
FOXN3O00409 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.14■□□□□ 0.81
FOXN3O00409 AC097488.1-201ENST00000507834 756 ntBASIC20.14■□□□□ 0.81
FOXN3O00409 AC008550.1-201ENST00000511500 884 ntBASIC20.14■□□□□ 0.81
FOXN3O00409 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.14■□□□□ 0.81
FOXN3O00409 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.14■□□□□ 0.81
FOXN3O00409 DGCR10-201ENST00000609839 495 ntBASIC20.14■□□□□ 0.81
FOXN3O00409 AC026471.5-201ENST00000615068 467 ntBASIC20.14■□□□□ 0.81
FOXN3O00409 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
FOXN3O00409 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
FOXN3O00409 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
FOXN3O00409 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC20.14■□□□□ 0.81
FOXN3O00409 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
FOXN3O00409 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
FOXN3O00409 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
FOXN3O00409 AL357033.4-201ENST00000617703 1807 ntBASIC20.13■□□□□ 0.81
FOXN3O00409 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
FOXN3O00409 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
FOXN3O00409 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
FOXN3O00409 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms