Protein–RNA interactions for Protein: O00268

TAF4, Transcription initiation factor TFIID subunit 4, humanhuman

Predictions only

Length 1,085 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF4O00268 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
TAF4O00268 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TAF4O00268 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
TAF4O00268 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TAF4O00268 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TAF4O00268 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TAF4O00268 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TAF4O00268 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TAF4O00268 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TAF4O00268 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TAF4O00268 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TAF4O00268 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TAF4O00268 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.42■□□□□ 0.54
TAF4O00268 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.42■□□□□ 0.54
TAF4O00268 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
TAF4O00268 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.42■□□□□ 0.54
TAF4O00268 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.42■□□□□ 0.54
TAF4O00268 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
TAF4O00268 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.42■□□□□ 0.54
TAF4O00268 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.42■□□□□ 0.54
TAF4O00268 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TAF4O00268 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
TAF4O00268 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TAF4O00268 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TAF4O00268 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TAF4O00268 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.42■□□□□ 0.54
TAF4O00268 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.42■□□□□ 0.54
TAF4O00268 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
TAF4O00268 PTBP1P-201ENST00000554374 1601 ntBASIC18.41■□□□□ 0.54
TAF4O00268 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.41■□□□□ 0.54
TAF4O00268 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TAF4O00268 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.41■□□□□ 0.54
TAF4O00268 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
TAF4O00268 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.41■□□□□ 0.54
TAF4O00268 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TAF4O00268 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.41■□□□□ 0.54
TAF4O00268 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TAF4O00268 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.41■□□□□ 0.54
TAF4O00268 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TAF4O00268 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TAF4O00268 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TAF4O00268 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.41■□□□□ 0.54
TAF4O00268 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.41■□□□□ 0.54
TAF4O00268 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
TAF4O00268 AC104692.2-201ENST00000603054 253 ntBASIC18.41■□□□□ 0.54
TAF4O00268 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TAF4O00268 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TAF4O00268 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TAF4O00268 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TAF4O00268 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.41■□□□□ 0.54
TAF4O00268 AC099778.1-201ENST00000568593 1911 ntBASIC18.41■□□□□ 0.54
TAF4O00268 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.4■□□□□ 0.54
TAF4O00268 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.4■□□□□ 0.54
TAF4O00268 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
TAF4O00268 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TAF4O00268 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
TAF4O00268 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TAF4O00268 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
TAF4O00268 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.4■□□□□ 0.54
TAF4O00268 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TAF4O00268 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.4■□□□□ 0.54
TAF4O00268 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.4■□□□□ 0.54
TAF4O00268 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
TAF4O00268 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.4■□□□□ 0.54
TAF4O00268 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.4■□□□□ 0.54
TAF4O00268 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.4■□□□□ 0.54
TAF4O00268 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TAF4O00268 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
TAF4O00268 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
TAF4O00268 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.4■□□□□ 0.54
TAF4O00268 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.4■□□□□ 0.54
TAF4O00268 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TAF4O00268 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
TAF4O00268 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.4■□□□□ 0.54
TAF4O00268 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.4■□□□□ 0.54
TAF4O00268 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.4■□□□□ 0.54
TAF4O00268 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TAF4O00268 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
TAF4O00268 AC120498.9-201ENST00000339021 3867 ntBASIC18.4■□□□□ 0.54
TAF4O00268 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TAF4O00268 LINC01311-201ENST00000565162 1445 ntBASIC18.4■□□□□ 0.54
TAF4O00268 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TAF4O00268 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TAF4O00268 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
TAF4O00268 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.39■□□□□ 0.54
TAF4O00268 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.39■□□□□ 0.54
TAF4O00268 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.39■□□□□ 0.54
TAF4O00268 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.54
TAF4O00268 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TAF4O00268 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TAF4O00268 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TAF4O00268 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
TAF4O00268 AL512408.1-201ENST00000569378 2000 ntBASIC18.39■□□□□ 0.53
TAF4O00268 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.39■□□□□ 0.53
TAF4O00268 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TAF4O00268 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TAF4O00268 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
TAF4O00268 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TAF4O00268 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
TAF4O00268 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms