Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDLIM1O00151 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDLIM1O00151 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDLIM1O00151 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDLIM1O00151 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDLIM1O00151 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.92■□□□□ 0.46
PDLIM1O00151 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
PDLIM1O00151 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.92■□□□□ 0.46
PDLIM1O00151 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
PDLIM1O00151 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDLIM1O00151 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PDLIM1O00151 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDLIM1O00151 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDLIM1O00151 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.92■□□□□ 0.46
PDLIM1O00151 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.92■□□□□ 0.46
PDLIM1O00151 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDLIM1O00151 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
PDLIM1O00151 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC17.92■□□□□ 0.46
PDLIM1O00151 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
PDLIM1O00151 OR2A1-AS1-201ENST00000462305 773 ntBASIC17.92■□□□□ 0.46
PDLIM1O00151 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC17.92■□□□□ 0.46
PDLIM1O00151 BET1L-207ENST00000529614 560 ntTSL 5 BASIC17.92■□□□□ 0.46
PDLIM1O00151 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC17.92■□□□□ 0.46
PDLIM1O00151 AC083880.1-201ENST00000608266 535 ntBASIC17.92■□□□□ 0.46
PDLIM1O00151 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDLIM1O00151 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDLIM1O00151 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
PDLIM1O00151 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.92■□□□□ 0.46
PDLIM1O00151 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDLIM1O00151 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDLIM1O00151 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDLIM1O00151 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDLIM1O00151 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDLIM1O00151 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDLIM1O00151 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.92■□□□□ 0.46
PDLIM1O00151 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
PDLIM1O00151 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.92■□□□□ 0.46
PDLIM1O00151 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDLIM1O00151 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDLIM1O00151 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDLIM1O00151 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.91■□□□□ 0.46
PDLIM1O00151 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
PDLIM1O00151 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.91■□□□□ 0.46
PDLIM1O00151 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PDLIM1O00151 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDLIM1O00151 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
PDLIM1O00151 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
PDLIM1O00151 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
PDLIM1O00151 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
PDLIM1O00151 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDLIM1O00151 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC17.91■□□□□ 0.46
PDLIM1O00151 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDLIM1O00151 SERPINH1P1-201ENST00000419794 1249 ntBASIC17.91■□□□□ 0.46
PDLIM1O00151 AC097658.1-201ENST00000475555 843 ntBASIC17.91■□□□□ 0.46
PDLIM1O00151 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC17.91■□□□□ 0.46
PDLIM1O00151 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC17.91■□□□□ 0.46
PDLIM1O00151 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PDLIM1O00151 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC17.91■□□□□ 0.46
PDLIM1O00151 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
PDLIM1O00151 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PDLIM1O00151 ABALON-201ENST00000629058 1903 ntBASIC17.91■□□□□ 0.46
PDLIM1O00151 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
PDLIM1O00151 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDLIM1O00151 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
PDLIM1O00151 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDLIM1O00151 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PDLIM1O00151 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.91■□□□□ 0.46
PDLIM1O00151 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDLIM1O00151 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDLIM1O00151 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
PDLIM1O00151 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.9■□□□□ 0.46
PDLIM1O00151 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.9■□□□□ 0.46
PDLIM1O00151 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC17.9■□□□□ 0.46
PDLIM1O00151 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.9■□□□□ 0.46
PDLIM1O00151 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PDLIM1O00151 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
PDLIM1O00151 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
PDLIM1O00151 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDLIM1O00151 AC018553.1-201ENST00000616682 1458 ntBASIC17.9■□□□□ 0.46
PDLIM1O00151 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
PDLIM1O00151 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDLIM1O00151 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.9■□□□□ 0.46
PDLIM1O00151 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PDLIM1O00151 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.9■□□□□ 0.46
PDLIM1O00151 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDLIM1O00151 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC17.9■□□□□ 0.46
PDLIM1O00151 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.9■□□□□ 0.46
PDLIM1O00151 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
PDLIM1O00151 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
PDLIM1O00151 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDLIM1O00151 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDLIM1O00151 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDLIM1O00151 NXN-202ENST00000537628 1340 ntTSL 3 BASIC17.9■□□□□ 0.46
PDLIM1O00151 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDLIM1O00151 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDLIM1O00151 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDLIM1O00151 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
PDLIM1O00151 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PDLIM1O00151 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.89■□□□□ 0.45
PDLIM1O00151 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms