Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
NPIPA2E9PIF3 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NPIPA2E9PIF3 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
NPIPA2E9PIF3 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.16■□□□□ 0.34
NPIPA2E9PIF3 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.16■□□□□ 0.34
NPIPA2E9PIF3 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NPIPA2E9PIF3 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
NPIPA2E9PIF3 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
NPIPA2E9PIF3 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
NPIPA2E9PIF3 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.15■□□□□ 0.34
NPIPA2E9PIF3 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
NPIPA2E9PIF3 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.15■□□□□ 0.34
NPIPA2E9PIF3 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
NPIPA2E9PIF3 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
NPIPA2E9PIF3 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.15■□□□□ 0.34
NPIPA2E9PIF3 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.15■□□□□ 0.34
NPIPA2E9PIF3 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
NPIPA2E9PIF3 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.15■□□□□ 0.34
NPIPA2E9PIF3 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.15■□□□□ 0.34
NPIPA2E9PIF3 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NPIPA2E9PIF3 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.15■□□□□ 0.34
NPIPA2E9PIF3 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.15■□□□□ 0.34
NPIPA2E9PIF3 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NPIPA2E9PIF3 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NPIPA2E9PIF3 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.15■□□□□ 0.34
NPIPA2E9PIF3 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.15■□□□□ 0.34
NPIPA2E9PIF3 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.15■□□□□ 0.34
NPIPA2E9PIF3 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.15■□□□□ 0.34
NPIPA2E9PIF3 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.15■□□□□ 0.34
NPIPA2E9PIF3 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NPIPA2E9PIF3 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
NPIPA2E9PIF3 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.15■□□□□ 0.34
NPIPA2E9PIF3 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NPIPA2E9PIF3 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
NPIPA2E9PIF3 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.15■□□□□ 0.34
NPIPA2E9PIF3 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.15■□□□□ 0.34
NPIPA2E9PIF3 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC17.15■□□□□ 0.34
NPIPA2E9PIF3 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.14■□□□□ 0.34
NPIPA2E9PIF3 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
NPIPA2E9PIF3 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NPIPA2E9PIF3 KRT8P45-201ENST00000414328 1447 ntBASIC17.14■□□□□ 0.33
NPIPA2E9PIF3 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NPIPA2E9PIF3 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NPIPA2E9PIF3 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NPIPA2E9PIF3 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.14■□□□□ 0.33
NPIPA2E9PIF3 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.14■□□□□ 0.33
NPIPA2E9PIF3 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NPIPA2E9PIF3 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
NPIPA2E9PIF3 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NPIPA2E9PIF3 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NPIPA2E9PIF3 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
NPIPA2E9PIF3 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.14■□□□□ 0.33
NPIPA2E9PIF3 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
NPIPA2E9PIF3 AL023973.1-201ENST00000624619 620 ntBASIC17.14■□□□□ 0.33
NPIPA2E9PIF3 AL031432.5-201ENST00000641059 760 ntBASIC17.14■□□□□ 0.33
NPIPA2E9PIF3 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.14■□□□□ 0.33
NPIPA2E9PIF3 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
NPIPA2E9PIF3 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NPIPA2E9PIF3 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NPIPA2E9PIF3 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NPIPA2E9PIF3 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
NPIPA2E9PIF3 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.14■□□□□ 0.33
NPIPA2E9PIF3 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
NPIPA2E9PIF3 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NPIPA2E9PIF3 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.13■□□□□ 0.33
NPIPA2E9PIF3 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NPIPA2E9PIF3 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NPIPA2E9PIF3 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
NPIPA2E9PIF3 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.13■□□□□ 0.33
NPIPA2E9PIF3 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
NPIPA2E9PIF3 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NPIPA2E9PIF3 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NPIPA2E9PIF3 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NPIPA2E9PIF3 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NPIPA2E9PIF3 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NPIPA2E9PIF3 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NPIPA2E9PIF3 FAM8A6P-201ENST00000407496 1135 ntBASIC17.13■□□□□ 0.33
NPIPA2E9PIF3 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.13■□□□□ 0.33
NPIPA2E9PIF3 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NPIPA2E9PIF3 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NPIPA2E9PIF3 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.13■□□□□ 0.33
NPIPA2E9PIF3 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.13■□□□□ 0.33
NPIPA2E9PIF3 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NPIPA2E9PIF3 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NPIPA2E9PIF3 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.13■□□□□ 0.33
NPIPA2E9PIF3 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.13■□□□□ 0.33
NPIPA2E9PIF3 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NPIPA2E9PIF3 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NPIPA2E9PIF3 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NPIPA2E9PIF3 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
NPIPA2E9PIF3 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.13■□□□□ 0.33
NPIPA2E9PIF3 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.12■□□□□ 0.33
NPIPA2E9PIF3 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC17.12■□□□□ 0.33
NPIPA2E9PIF3 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.12■□□□□ 0.33
NPIPA2E9PIF3 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.12■□□□□ 0.33
NPIPA2E9PIF3 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NPIPA2E9PIF3 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NPIPA2E9PIF3 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.12■□□□□ 0.33
NPIPA2E9PIF3 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
NPIPA2E9PIF3 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms