Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC21.88■■□□□ 1.09
TMEM88BA6NKF7 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TMEM88BA6NKF7 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TMEM88BA6NKF7 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
TMEM88BA6NKF7 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.88■■□□□ 1.09
TMEM88BA6NKF7 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC21.88■■□□□ 1.09
TMEM88BA6NKF7 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
TMEM88BA6NKF7 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TMEM88BA6NKF7 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TMEM88BA6NKF7 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TMEM88BA6NKF7 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TMEM88BA6NKF7 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
TMEM88BA6NKF7 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.87■■□□□ 1.09
TMEM88BA6NKF7 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TMEM88BA6NKF7 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC21.87■■□□□ 1.09
TMEM88BA6NKF7 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC21.87■■□□□ 1.09
TMEM88BA6NKF7 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TMEM88BA6NKF7 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
TMEM88BA6NKF7 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC21.87■■□□□ 1.09
TMEM88BA6NKF7 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC21.87■■□□□ 1.09
TMEM88BA6NKF7 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC21.87■■□□□ 1.09
TMEM88BA6NKF7 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
TMEM88BA6NKF7 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
TMEM88BA6NKF7 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
TMEM88BA6NKF7 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
TMEM88BA6NKF7 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TMEM88BA6NKF7 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC21.87■■□□□ 1.09
TMEM88BA6NKF7 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC21.87■■□□□ 1.09
TMEM88BA6NKF7 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TMEM88BA6NKF7 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
TMEM88BA6NKF7 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
TMEM88BA6NKF7 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TMEM88BA6NKF7 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
TMEM88BA6NKF7 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TMEM88BA6NKF7 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TMEM88BA6NKF7 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
TMEM88BA6NKF7 RCN1P2-201ENST00000398357 915 ntBASIC21.86■■□□□ 1.09
TMEM88BA6NKF7 WBP2-203ENST00000433525 928 ntTSL 2 BASIC21.86■■□□□ 1.09
TMEM88BA6NKF7 RPS2P1-201ENST00000434010 821 ntBASIC21.86■■□□□ 1.09
TMEM88BA6NKF7 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC21.86■■□□□ 1.09
TMEM88BA6NKF7 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC21.86■■□□□ 1.09
TMEM88BA6NKF7 AC021087.4-201ENST00000563761 564 ntBASIC21.86■■□□□ 1.09
TMEM88BA6NKF7 MTDHP5-201ENST00000598980 586 ntBASIC21.86■■□□□ 1.09
TMEM88BA6NKF7 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC21.86■■□□□ 1.09
TMEM88BA6NKF7 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TMEM88BA6NKF7 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.86■■□□□ 1.09
TMEM88BA6NKF7 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC21.86■■□□□ 1.09
TMEM88BA6NKF7 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC21.86■■□□□ 1.09
TMEM88BA6NKF7 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
TMEM88BA6NKF7 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TMEM88BA6NKF7 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
TMEM88BA6NKF7 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC21.85■■□□□ 1.09
TMEM88BA6NKF7 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.85■■□□□ 1.09
TMEM88BA6NKF7 MED16-201ENST00000269814 1199 ntTSL 5 BASIC21.85■■□□□ 1.09
TMEM88BA6NKF7 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TMEM88BA6NKF7 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
TMEM88BA6NKF7 PON3-203ENST00000427422 894 ntTSL 3 BASIC21.85■■□□□ 1.09
TMEM88BA6NKF7 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC21.85■■□□□ 1.09
TMEM88BA6NKF7 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC21.85■■□□□ 1.09
TMEM88BA6NKF7 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC21.85■■□□□ 1.09
TMEM88BA6NKF7 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
TMEM88BA6NKF7 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
TMEM88BA6NKF7 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TMEM88BA6NKF7 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TMEM88BA6NKF7 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
TMEM88BA6NKF7 AL109659.2-201ENST00000606809 1674 ntBASIC21.85■■□□□ 1.09
TMEM88BA6NKF7 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
TMEM88BA6NKF7 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TMEM88BA6NKF7 CCS-201ENST00000310190 942 ntTSL 5 BASIC21.84■■□□□ 1.09
TMEM88BA6NKF7 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TMEM88BA6NKF7 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC21.84■■□□□ 1.09
TMEM88BA6NKF7 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TMEM88BA6NKF7 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC21.84■■□□□ 1.09
TMEM88BA6NKF7 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TMEM88BA6NKF7 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC21.84■■□□□ 1.09
TMEM88BA6NKF7 PAM16-208ENST00000573553 722 ntTSL 2 BASIC21.84■■□□□ 1.09
TMEM88BA6NKF7 MIR3180-4-201ENST00000582223 153 ntBASIC21.84■■□□□ 1.09
TMEM88BA6NKF7 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC21.84■■□□□ 1.09
TMEM88BA6NKF7 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC21.84■■□□□ 1.09
TMEM88BA6NKF7 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TMEM88BA6NKF7 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
TMEM88BA6NKF7 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
TMEM88BA6NKF7 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
TMEM88BA6NKF7 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC21.84■■□□□ 1.09
TMEM88BA6NKF7 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
TMEM88BA6NKF7 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TMEM88BA6NKF7 AC009237.14-201ENST00000609975 1594 ntBASIC21.83■■□□□ 1.09
TMEM88BA6NKF7 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
TMEM88BA6NKF7 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
TMEM88BA6NKF7 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TMEM88BA6NKF7 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC21.83■■□□□ 1.09
TMEM88BA6NKF7 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
TMEM88BA6NKF7 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.83■■□□□ 1.09
TMEM88BA6NKF7 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.08
TMEM88BA6NKF7 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
TMEM88BA6NKF7 KRT89P-201ENST00000620027 1478 ntBASIC21.83■■□□□ 1.08
TMEM88BA6NKF7 AF106564.1-201ENST00000607058 2553 ntBASIC21.83■■□□□ 1.08
TMEM88BA6NKF7 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
TMEM88BA6NKF7 GOLGA6L5P-202ENST00000515341 1828 ntBASIC21.83■■□□□ 1.08
TMEM88BA6NKF7 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC21.82■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms