Protein–RNA interactions for Protein: A6NHL2

TUBAL3, Tubulin alpha chain-like 3, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBAL3A6NHL2 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TUBAL3A6NHL2 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.91■□□□□ 0.3
TUBAL3A6NHL2 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TUBAL3A6NHL2 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.91■□□□□ 0.3
TUBAL3A6NHL2 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TUBAL3A6NHL2 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TUBAL3A6NHL2 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TUBAL3A6NHL2 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC16.9■□□□□ 0.3
TUBAL3A6NHL2 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TUBAL3A6NHL2 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
TUBAL3A6NHL2 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.9■□□□□ 0.3
TUBAL3A6NHL2 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
TUBAL3A6NHL2 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TUBAL3A6NHL2 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
TUBAL3A6NHL2 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TUBAL3A6NHL2 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TUBAL3A6NHL2 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TUBAL3A6NHL2 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TUBAL3A6NHL2 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TUBAL3A6NHL2 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
TUBAL3A6NHL2 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.9■□□□□ 0.3
TUBAL3A6NHL2 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC16.9■□□□□ 0.3
TUBAL3A6NHL2 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
TUBAL3A6NHL2 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TUBAL3A6NHL2 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.9■□□□□ 0.3
TUBAL3A6NHL2 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.9■□□□□ 0.3
TUBAL3A6NHL2 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TUBAL3A6NHL2 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC16.9■□□□□ 0.3
TUBAL3A6NHL2 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC16.9■□□□□ 0.3
TUBAL3A6NHL2 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC16.9■□□□□ 0.3
TUBAL3A6NHL2 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TUBAL3A6NHL2 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.9■□□□□ 0.3
TUBAL3A6NHL2 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TUBAL3A6NHL2 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TUBAL3A6NHL2 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC16.9■□□□□ 0.3
TUBAL3A6NHL2 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
TUBAL3A6NHL2 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TUBAL3A6NHL2 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TUBAL3A6NHL2 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC16.9■□□□□ 0.3
TUBAL3A6NHL2 CD37-204ENST00000535669 1674 ntTSL 2 BASIC16.9■□□□□ 0.3
TUBAL3A6NHL2 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.9■□□□□ 0.3
TUBAL3A6NHL2 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TUBAL3A6NHL2 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TUBAL3A6NHL2 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
TUBAL3A6NHL2 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC16.9■□□□□ 0.3
TUBAL3A6NHL2 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.9■□□□□ 0.3
TUBAL3A6NHL2 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TUBAL3A6NHL2 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TUBAL3A6NHL2 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.9■□□□□ 0.3
TUBAL3A6NHL2 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TUBAL3A6NHL2 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TUBAL3A6NHL2 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
TUBAL3A6NHL2 AP001271.2-201ENST00000624018 1556 ntBASIC16.89■□□□□ 0.3
TUBAL3A6NHL2 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16.89■□□□□ 0.3
TUBAL3A6NHL2 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC16.89■□□□□ 0.29
TUBAL3A6NHL2 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TUBAL3A6NHL2 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC16.89■□□□□ 0.29
TUBAL3A6NHL2 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TUBAL3A6NHL2 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
TUBAL3A6NHL2 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TUBAL3A6NHL2 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TUBAL3A6NHL2 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.89■□□□□ 0.29
TUBAL3A6NHL2 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.89■□□□□ 0.29
TUBAL3A6NHL2 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TUBAL3A6NHL2 RNF152P1-201ENST00000397754 604 ntBASIC16.89■□□□□ 0.29
TUBAL3A6NHL2 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
TUBAL3A6NHL2 AC117947.1-201ENST00000427448 529 ntBASIC16.89■□□□□ 0.29
TUBAL3A6NHL2 TSPY17P-201ENST00000450329 467 ntBASIC16.89■□□□□ 0.29
TUBAL3A6NHL2 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC16.89■□□□□ 0.29
TUBAL3A6NHL2 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC16.89■□□□□ 0.29
TUBAL3A6NHL2 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.89■□□□□ 0.29
TUBAL3A6NHL2 AL160286.2-201ENST00000567150 934 ntBASIC16.89■□□□□ 0.29
TUBAL3A6NHL2 AL512604.3-201ENST00000569583 964 ntBASIC16.89■□□□□ 0.29
TUBAL3A6NHL2 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.89■□□□□ 0.29
TUBAL3A6NHL2 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
TUBAL3A6NHL2 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
TUBAL3A6NHL2 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TUBAL3A6NHL2 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
TUBAL3A6NHL2 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC16.89■□□□□ 0.29
TUBAL3A6NHL2 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TUBAL3A6NHL2 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TUBAL3A6NHL2 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
TUBAL3A6NHL2 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TUBAL3A6NHL2 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TUBAL3A6NHL2 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TUBAL3A6NHL2 BX119927.1-201ENST00000636596 1552 ntBASIC16.89■□□□□ 0.29
TUBAL3A6NHL2 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TUBAL3A6NHL2 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TUBAL3A6NHL2 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TUBAL3A6NHL2 PCDHB18P-201ENST00000524813 2368 ntBASIC16.88■□□□□ 0.29
TUBAL3A6NHL2 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TUBAL3A6NHL2 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC16.88■□□□□ 0.29
TUBAL3A6NHL2 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC16.88■□□□□ 0.29
TUBAL3A6NHL2 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TUBAL3A6NHL2 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.88■□□□□ 0.29
TUBAL3A6NHL2 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
TUBAL3A6NHL2 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TUBAL3A6NHL2 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
TUBAL3A6NHL2 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TUBAL3A6NHL2 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms