Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC13.3□□□□□ -0.28
LINC01546A6NGU7 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC01546A6NGU7 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
LINC01546A6NGU7 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC13.3□□□□□ -0.28
LINC01546A6NGU7 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC01546A6NGU7 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC01546A6NGU7 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
LINC01546A6NGU7 SERP1-205ENST00000487153 657 ntTSL 4 BASIC13.3□□□□□ -0.28
LINC01546A6NGU7 BRI3-207ENST00000539286 699 ntTSL 2 BASIC13.3□□□□□ -0.28
LINC01546A6NGU7 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LINC01546A6NGU7 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC13.3□□□□□ -0.28
LINC01546A6NGU7 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC13.3□□□□□ -0.28
LINC01546A6NGU7 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC13.3□□□□□ -0.28
LINC01546A6NGU7 AC011676.5-201ENST00000624864 2660 ntBASIC13.3□□□□□ -0.28
LINC01546A6NGU7 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC01546A6NGU7 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC01546A6NGU7 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC01546A6NGU7 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC01546A6NGU7 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
LINC01546A6NGU7 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LINC01546A6NGU7 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
LINC01546A6NGU7 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC13.29□□□□□ -0.28
LINC01546A6NGU7 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC13.29□□□□□ -0.28
LINC01546A6NGU7 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC13.29□□□□□ -0.28
LINC01546A6NGU7 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LINC01546A6NGU7 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LINC01546A6NGU7 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC13.29□□□□□ -0.28
LINC01546A6NGU7 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC13.29□□□□□ -0.28
LINC01546A6NGU7 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LINC01546A6NGU7 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC01546A6NGU7 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LINC01546A6NGU7 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC01546A6NGU7 LTF-203ENST00000426532 2494 ntTSL 2 BASIC13.29□□□□□ -0.28
LINC01546A6NGU7 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC01546A6NGU7 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LINC01546A6NGU7 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC01546A6NGU7 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC01546A6NGU7 BMP1-204ENST00000397814 836 ntTSL 4 BASIC13.29□□□□□ -0.28
LINC01546A6NGU7 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LINC01546A6NGU7 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC13.29□□□□□ -0.28
LINC01546A6NGU7 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC13.29□□□□□ -0.28
LINC01546A6NGU7 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC13.29□□□□□ -0.28
LINC01546A6NGU7 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
LINC01546A6NGU7 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
LINC01546A6NGU7 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC13.29□□□□□ -0.28
LINC01546A6NGU7 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
LINC01546A6NGU7 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC01546A6NGU7 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC01546A6NGU7 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
LINC01546A6NGU7 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC13.29□□□□□ -0.28
LINC01546A6NGU7 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LINC01546A6NGU7 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LINC01546A6NGU7 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC01546A6NGU7 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
LINC01546A6NGU7 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LINC01546A6NGU7 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC01546A6NGU7 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC13.28□□□□□ -0.28
LINC01546A6NGU7 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
LINC01546A6NGU7 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LINC01546A6NGU7 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC01546A6NGU7 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC13.28□□□□□ -0.28
LINC01546A6NGU7 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC01546A6NGU7 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC01546A6NGU7 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
LINC01546A6NGU7 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC01546A6NGU7 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
LINC01546A6NGU7 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LINC01546A6NGU7 AC096631.2-201ENST00000436136 790 ntBASIC13.28□□□□□ -0.28
LINC01546A6NGU7 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LINC01546A6NGU7 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC13.28□□□□□ -0.28
LINC01546A6NGU7 NF2-208ENST00000403435 2568 ntTSL 5 BASIC13.28□□□□□ -0.28
LINC01546A6NGU7 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LINC01546A6NGU7 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LINC01546A6NGU7 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC13.28□□□□□ -0.28
LINC01546A6NGU7 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC01546A6NGU7 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC01546A6NGU7 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC13.28□□□□□ -0.28
LINC01546A6NGU7 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC01546A6NGU7 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC01546A6NGU7 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC01546A6NGU7 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
LINC01546A6NGU7 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
LINC01546A6NGU7 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
LINC01546A6NGU7 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
LINC01546A6NGU7 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
LINC01546A6NGU7 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.28
LINC01546A6NGU7 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC13.27□□□□□ -0.28
LINC01546A6NGU7 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
LINC01546A6NGU7 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
LINC01546A6NGU7 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
LINC01546A6NGU7 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
LINC01546A6NGU7 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
LINC01546A6NGU7 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC13.27□□□□□ -0.28
LINC01546A6NGU7 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
LINC01546A6NGU7 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
LINC01546A6NGU7 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
LINC01546A6NGU7 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC01546A6NGU7 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC01546A6NGU7 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC13.27□□□□□ -0.29
LINC01546A6NGU7 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms