Protein–RNA interactions for Protein: A0A0C4DH25

IGKV3D-20, Immunoglobulin kappa variable 3D-20, humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-20A0A0C4DH25 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
IGKV3D-20A0A0C4DH25 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC14.03□□□□□ -0.16
IGKV3D-20A0A0C4DH25 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
IGKV3D-20A0A0C4DH25 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
IGKV3D-20A0A0C4DH25 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
IGKV3D-20A0A0C4DH25 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
IGKV3D-20A0A0C4DH25 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
IGKV3D-20A0A0C4DH25 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC14.03□□□□□ -0.16
IGKV3D-20A0A0C4DH25 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
IGKV3D-20A0A0C4DH25 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
IGKV3D-20A0A0C4DH25 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
IGKV3D-20A0A0C4DH25 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC14.02□□□□□ -0.16
IGKV3D-20A0A0C4DH25 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC14.02□□□□□ -0.16
IGKV3D-20A0A0C4DH25 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
IGKV3D-20A0A0C4DH25 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
IGKV3D-20A0A0C4DH25 AC068880.1-201ENST00000507289 2297 ntBASIC14.02□□□□□ -0.16
IGKV3D-20A0A0C4DH25 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
IGKV3D-20A0A0C4DH25 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
IGKV3D-20A0A0C4DH25 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
IGKV3D-20A0A0C4DH25 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
IGKV3D-20A0A0C4DH25 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
IGKV3D-20A0A0C4DH25 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
IGKV3D-20A0A0C4DH25 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
IGKV3D-20A0A0C4DH25 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC14.02□□□□□ -0.16
IGKV3D-20A0A0C4DH25 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
IGKV3D-20A0A0C4DH25 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
IGKV3D-20A0A0C4DH25 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
IGKV3D-20A0A0C4DH25 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC14.02□□□□□ -0.16
IGKV3D-20A0A0C4DH25 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
IGKV3D-20A0A0C4DH25 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
IGKV3D-20A0A0C4DH25 CDCA4P2-201ENST00000441182 718 ntBASIC14.02□□□□□ -0.17
IGKV3D-20A0A0C4DH25 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC14.02□□□□□ -0.17
IGKV3D-20A0A0C4DH25 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC14.02□□□□□ -0.17
IGKV3D-20A0A0C4DH25 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
IGKV3D-20A0A0C4DH25 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC14.02□□□□□ -0.17
IGKV3D-20A0A0C4DH25 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC14.02□□□□□ -0.17
IGKV3D-20A0A0C4DH25 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
IGKV3D-20A0A0C4DH25 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
IGKV3D-20A0A0C4DH25 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC14.02□□□□□ -0.17
IGKV3D-20A0A0C4DH25 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC14.02□□□□□ -0.17
IGKV3D-20A0A0C4DH25 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
IGKV3D-20A0A0C4DH25 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
IGKV3D-20A0A0C4DH25 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
IGKV3D-20A0A0C4DH25 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
IGKV3D-20A0A0C4DH25 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
IGKV3D-20A0A0C4DH25 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
IGKV3D-20A0A0C4DH25 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC14.01□□□□□ -0.17
IGKV3D-20A0A0C4DH25 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
IGKV3D-20A0A0C4DH25 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
IGKV3D-20A0A0C4DH25 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
IGKV3D-20A0A0C4DH25 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC14.01□□□□□ -0.17
IGKV3D-20A0A0C4DH25 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
IGKV3D-20A0A0C4DH25 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC14.01□□□□□ -0.17
IGKV3D-20A0A0C4DH25 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
IGKV3D-20A0A0C4DH25 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
IGKV3D-20A0A0C4DH25 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
IGKV3D-20A0A0C4DH25 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
IGKV3D-20A0A0C4DH25 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC14.01□□□□□ -0.17
IGKV3D-20A0A0C4DH25 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
IGKV3D-20A0A0C4DH25 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC14.01□□□□□ -0.17
IGKV3D-20A0A0C4DH25 METTL15-202ENST00000403099 795 ntTSL 5 BASIC14.01□□□□□ -0.17
IGKV3D-20A0A0C4DH25 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC14.01□□□□□ -0.17
IGKV3D-20A0A0C4DH25 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC14.01□□□□□ -0.17
IGKV3D-20A0A0C4DH25 AC091874.3-201ENST00000512672 1195 ntBASIC14.01□□□□□ -0.17
IGKV3D-20A0A0C4DH25 OAS3-207ENST00000551007 998 ntTSL 2 BASIC14.01□□□□□ -0.17
IGKV3D-20A0A0C4DH25 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC14.01□□□□□ -0.17
IGKV3D-20A0A0C4DH25 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
IGKV3D-20A0A0C4DH25 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC14.01□□□□□ -0.17
IGKV3D-20A0A0C4DH25 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC14.01□□□□□ -0.17
IGKV3D-20A0A0C4DH25 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
IGKV3D-20A0A0C4DH25 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
IGKV3D-20A0A0C4DH25 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
IGKV3D-20A0A0C4DH25 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
IGKV3D-20A0A0C4DH25 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
IGKV3D-20A0A0C4DH25 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
IGKV3D-20A0A0C4DH25 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC14.01□□□□□ -0.17
IGKV3D-20A0A0C4DH25 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
IGKV3D-20A0A0C4DH25 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
IGKV3D-20A0A0C4DH25 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
IGKV3D-20A0A0C4DH25 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
IGKV3D-20A0A0C4DH25 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
IGKV3D-20A0A0C4DH25 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
IGKV3D-20A0A0C4DH25 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
IGKV3D-20A0A0C4DH25 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
IGKV3D-20A0A0C4DH25 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
IGKV3D-20A0A0C4DH25 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
IGKV3D-20A0A0C4DH25 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
IGKV3D-20A0A0C4DH25 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC14□□□□□ -0.17
IGKV3D-20A0A0C4DH25 ABALON-201ENST00000629058 1903 ntBASIC14□□□□□ -0.17
IGKV3D-20A0A0C4DH25 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
IGKV3D-20A0A0C4DH25 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
IGKV3D-20A0A0C4DH25 MIR663A-201ENST00000385250 93 ntBASIC14□□□□□ -0.17
IGKV3D-20A0A0C4DH25 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC14□□□□□ -0.17
IGKV3D-20A0A0C4DH25 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC14□□□□□ -0.17
IGKV3D-20A0A0C4DH25 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC14□□□□□ -0.17
IGKV3D-20A0A0C4DH25 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC14□□□□□ -0.17
IGKV3D-20A0A0C4DH25 AC092118.2-201ENST00000613495 667 ntBASIC14□□□□□ -0.17
IGKV3D-20A0A0C4DH25 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC14□□□□□ -0.17
IGKV3D-20A0A0C4DH25 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC14□□□□□ -0.17
IGKV3D-20A0A0C4DH25 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms