Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV12-3A0A0B4J271 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV12-3A0A0B4J271 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
TRAV12-3A0A0B4J271 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC14.03□□□□□ -0.16
TRAV12-3A0A0B4J271 TSPY21P-201ENST00000433481 731 ntBASIC14.03□□□□□ -0.16
TRAV12-3A0A0B4J271 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC14.03□□□□□ -0.16
TRAV12-3A0A0B4J271 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
TRAV12-3A0A0B4J271 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC14.03□□□□□ -0.16
TRAV12-3A0A0B4J271 LY6E-205ENST00000519611 635 ntTSL 3 BASIC14.03□□□□□ -0.16
TRAV12-3A0A0B4J271 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
TRAV12-3A0A0B4J271 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC14.03□□□□□ -0.16
TRAV12-3A0A0B4J271 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV12-3A0A0B4J271 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV12-3A0A0B4J271 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV12-3A0A0B4J271 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV12-3A0A0B4J271 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV12-3A0A0B4J271 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
TRAV12-3A0A0B4J271 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV12-3A0A0B4J271 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV12-3A0A0B4J271 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV12-3A0A0B4J271 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV12-3A0A0B4J271 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV12-3A0A0B4J271 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV12-3A0A0B4J271 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
TRAV12-3A0A0B4J271 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV12-3A0A0B4J271 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV12-3A0A0B4J271 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV12-3A0A0B4J271 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC14.03□□□□□ -0.16
TRAV12-3A0A0B4J271 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC14.02□□□□□ -0.16
TRAV12-3A0A0B4J271 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV12-3A0A0B4J271 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV12-3A0A0B4J271 NEFHP1-201ENST00000412845 2629 ntBASIC14.02□□□□□ -0.16
TRAV12-3A0A0B4J271 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV12-3A0A0B4J271 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
TRAV12-3A0A0B4J271 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV12-3A0A0B4J271 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
TRAV12-3A0A0B4J271 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC14.02□□□□□ -0.16
TRAV12-3A0A0B4J271 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC14.02□□□□□ -0.16
TRAV12-3A0A0B4J271 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV12-3A0A0B4J271 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV12-3A0A0B4J271 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC14.02□□□□□ -0.16
TRAV12-3A0A0B4J271 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
TRAV12-3A0A0B4J271 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV12-3A0A0B4J271 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC14.02□□□□□ -0.16
TRAV12-3A0A0B4J271 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV12-3A0A0B4J271 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV12-3A0A0B4J271 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV12-3A0A0B4J271 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC14.02□□□□□ -0.16
TRAV12-3A0A0B4J271 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
TRAV12-3A0A0B4J271 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV12-3A0A0B4J271 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV12-3A0A0B4J271 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV12-3A0A0B4J271 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV12-3A0A0B4J271 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC14.02□□□□□ -0.17
TRAV12-3A0A0B4J271 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC14.02□□□□□ -0.17
TRAV12-3A0A0B4J271 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC14.02□□□□□ -0.17
TRAV12-3A0A0B4J271 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC14.02□□□□□ -0.17
TRAV12-3A0A0B4J271 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC14.02□□□□□ -0.17
TRAV12-3A0A0B4J271 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV12-3A0A0B4J271 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
TRAV12-3A0A0B4J271 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV12-3A0A0B4J271 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV12-3A0A0B4J271 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV12-3A0A0B4J271 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
TRAV12-3A0A0B4J271 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC14.02□□□□□ -0.17
TRAV12-3A0A0B4J271 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV12-3A0A0B4J271 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV12-3A0A0B4J271 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
TRAV12-3A0A0B4J271 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
TRAV12-3A0A0B4J271 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV12-3A0A0B4J271 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC14.02□□□□□ -0.17
TRAV12-3A0A0B4J271 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV12-3A0A0B4J271 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV12-3A0A0B4J271 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV12-3A0A0B4J271 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV12-3A0A0B4J271 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV12-3A0A0B4J271 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC14.01□□□□□ -0.17
TRAV12-3A0A0B4J271 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV12-3A0A0B4J271 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC14.01□□□□□ -0.17
TRAV12-3A0A0B4J271 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV12-3A0A0B4J271 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
TRAV12-3A0A0B4J271 AC104581.1-202ENST00000635932 2618 ntBASIC14.01□□□□□ -0.17
TRAV12-3A0A0B4J271 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC14.01□□□□□ -0.17
TRAV12-3A0A0B4J271 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV12-3A0A0B4J271 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC14.01□□□□□ -0.17
TRAV12-3A0A0B4J271 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC14.01□□□□□ -0.17
TRAV12-3A0A0B4J271 USP49-202ENST00000373010 2446 ntTSL 5 BASIC14.01□□□□□ -0.17
TRAV12-3A0A0B4J271 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV12-3A0A0B4J271 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
TRAV12-3A0A0B4J271 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV12-3A0A0B4J271 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
TRAV12-3A0A0B4J271 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV12-3A0A0B4J271 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV12-3A0A0B4J271 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV12-3A0A0B4J271 KRT16P5-201ENST00000455284 522 ntBASIC14.01□□□□□ -0.17
TRAV12-3A0A0B4J271 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC14.01□□□□□ -0.17
TRAV12-3A0A0B4J271 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV12-3A0A0B4J271 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV12-3A0A0B4J271 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
TRAV12-3A0A0B4J271 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms