Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 PNMA6B-201ENST00000538162 1200 ntBASIC13.21□□□□□ -0.29
TRAV8-4A0A0B4J246 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC13.21□□□□□ -0.29
TRAV8-4A0A0B4J246 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC13.21□□□□□ -0.29
TRAV8-4A0A0B4J246 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC13.21□□□□□ -0.29
TRAV8-4A0A0B4J246 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRAV8-4A0A0B4J246 POLI-202ENST00000406285 2030 ntTSL 2 BASIC13.21□□□□□ -0.29
TRAV8-4A0A0B4J246 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC13.21□□□□□ -0.29
TRAV8-4A0A0B4J246 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
TRAV8-4A0A0B4J246 AL139384.1-201ENST00000612143 3047 ntBASIC13.21□□□□□ -0.29
TRAV8-4A0A0B4J246 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC13.21□□□□□ -0.29
TRAV8-4A0A0B4J246 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRAV8-4A0A0B4J246 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRAV8-4A0A0B4J246 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRAV8-4A0A0B4J246 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TRAV8-4A0A0B4J246 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TRAV8-4A0A0B4J246 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.3
TRAV8-4A0A0B4J246 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TRAV8-4A0A0B4J246 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TRAV8-4A0A0B4J246 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TRAV8-4A0A0B4J246 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
TRAV8-4A0A0B4J246 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC13.21□□□□□ -0.3
TRAV8-4A0A0B4J246 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
TRAV8-4A0A0B4J246 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC13.2□□□□□ -0.3
TRAV8-4A0A0B4J246 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC13.2□□□□□ -0.3
TRAV8-4A0A0B4J246 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
TRAV8-4A0A0B4J246 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
TRAV8-4A0A0B4J246 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV8-4A0A0B4J246 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV8-4A0A0B4J246 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
TRAV8-4A0A0B4J246 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV8-4A0A0B4J246 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC13.2□□□□□ -0.3
TRAV8-4A0A0B4J246 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
TRAV8-4A0A0B4J246 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV8-4A0A0B4J246 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
TRAV8-4A0A0B4J246 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV8-4A0A0B4J246 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV8-4A0A0B4J246 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV8-4A0A0B4J246 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
TRAV8-4A0A0B4J246 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC13.2□□□□□ -0.3
TRAV8-4A0A0B4J246 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
TRAV8-4A0A0B4J246 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
TRAV8-4A0A0B4J246 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV8-4A0A0B4J246 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV8-4A0A0B4J246 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV8-4A0A0B4J246 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV8-4A0A0B4J246 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV8-4A0A0B4J246 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV8-4A0A0B4J246 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV8-4A0A0B4J246 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
TRAV8-4A0A0B4J246 AC069152.1-201ENST00000438030 544 ntBASIC13.2□□□□□ -0.3
TRAV8-4A0A0B4J246 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC13.2□□□□□ -0.3
TRAV8-4A0A0B4J246 RPS2P52-201ENST00000469610 820 ntBASIC13.2□□□□□ -0.3
TRAV8-4A0A0B4J246 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC13.2□□□□□ -0.3
TRAV8-4A0A0B4J246 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC13.2□□□□□ -0.3
TRAV8-4A0A0B4J246 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC13.2□□□□□ -0.3
TRAV8-4A0A0B4J246 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC13.2□□□□□ -0.3
TRAV8-4A0A0B4J246 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC13.2□□□□□ -0.3
TRAV8-4A0A0B4J246 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC13.2□□□□□ -0.3
TRAV8-4A0A0B4J246 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC13.2□□□□□ -0.3
TRAV8-4A0A0B4J246 AC006557.6-201ENST00000623071 864 ntBASIC13.2□□□□□ -0.3
TRAV8-4A0A0B4J246 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV8-4A0A0B4J246 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV8-4A0A0B4J246 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC13.2□□□□□ -0.3
TRAV8-4A0A0B4J246 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC13.2□□□□□ -0.3
TRAV8-4A0A0B4J246 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
TRAV8-4A0A0B4J246 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV8-4A0A0B4J246 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC13.2□□□□□ -0.3
TRAV8-4A0A0B4J246 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV8-4A0A0B4J246 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV8-4A0A0B4J246 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV8-4A0A0B4J246 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
TRAV8-4A0A0B4J246 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV8-4A0A0B4J246 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV8-4A0A0B4J246 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC13.2□□□□□ -0.3
TRAV8-4A0A0B4J246 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
TRAV8-4A0A0B4J246 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV8-4A0A0B4J246 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC13.19□□□□□ -0.3
TRAV8-4A0A0B4J246 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV8-4A0A0B4J246 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
TRAV8-4A0A0B4J246 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV8-4A0A0B4J246 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
TRAV8-4A0A0B4J246 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
TRAV8-4A0A0B4J246 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC13.19□□□□□ -0.3
TRAV8-4A0A0B4J246 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV8-4A0A0B4J246 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV8-4A0A0B4J246 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV8-4A0A0B4J246 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV8-4A0A0B4J246 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV8-4A0A0B4J246 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV8-4A0A0B4J246 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV8-4A0A0B4J246 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV8-4A0A0B4J246 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC13.19□□□□□ -0.3
TRAV8-4A0A0B4J246 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV8-4A0A0B4J246 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC13.19□□□□□ -0.3
TRAV8-4A0A0B4J246 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV8-4A0A0B4J246 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV8-4A0A0B4J246 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV8-4A0A0B4J246 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
TRAV8-4A0A0B4J246 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC13.19□□□□□ -0.3
TRAV8-4A0A0B4J246 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms