Protein–RNA interactions for Protein: O75607

NPM3, Nucleoplasmin-3, humanhuman

Known RBP Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPM3O75607 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
NPM3O75607 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
NPM3O75607 SNORA6-201ENST00000384033 151 ntBASIC3.89□□□□□ -1.79
NPM3O75607 SNORA7.4-201ENST00000384249 137 ntBASIC3.89□□□□□ -1.79
NPM3O75607 RNA5SP229-201ENST00000410809 99 ntBASIC3.89□□□□□ -1.79
NPM3O75607 RNU7-13P-201ENST00000516413 62 ntBASIC3.89□□□□□ -1.79
NPM3O75607 SNORA31.26-201ENST00000517250 137 ntBASIC3.89□□□□□ -1.79
NPM3O75607 MIR2682-201ENST00000580305 110 ntBASIC3.89□□□□□ -1.79
NPM3O75607 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
NPM3O75607 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
NPM3O75607 RNU6-495P-201ENST00000362995 107 ntBASIC3.88□□□□□ -1.79
NPM3O75607 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
NPM3O75607 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
NPM3O75607 AL359511.1-201ENST00000402970 211 ntBASIC3.88□□□□□ -1.79
NPM3O75607 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC3.88□□□□□ -1.79
NPM3O75607 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.88□□□□□ -1.79
NPM3O75607 SCARNA21.1-201ENST00000515996 128 ntBASIC3.87□□□□□ -1.79
NPM3O75607 uc_338.1-201ENST00000612113 180 ntBASIC3.87□□□□□ -1.79
NPM3O75607 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.87□□□□□ -1.79
NPM3O75607 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.87□□□□□ -1.79
NPM3O75607 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
NPM3O75607 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
NPM3O75607 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
NPM3O75607 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.87□□□□□ -1.79
NPM3O75607 RNA5SP245-201ENST00000364239 121 ntBASIC3.86□□□□□ -1.79
NPM3O75607 SNORA67.3-201ENST00000384366 140 ntBASIC3.86□□□□□ -1.79
NPM3O75607 RN7SL863P-201ENST00000462370 296 ntBASIC3.86□□□□□ -1.79
NPM3O75607 MIR8074-201ENST00000615081 81 ntBASIC3.86□□□□□ -1.79
NPM3O75607 MIR622-201ENST00000638396 96 ntBASIC3.86□□□□□ -1.79
NPM3O75607 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.86□□□□□ -1.79
NPM3O75607 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
NPM3O75607 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.85□□□□□ -1.79
NPM3O75607 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
NPM3O75607 RNU6-364P-201ENST00000384387 107 ntBASIC3.85□□□□□ -1.79
NPM3O75607 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
NPM3O75607 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
NPM3O75607 AC093908.1-201ENST00000623125 8092 ntBASIC3.83□□□□□ -1.8
NPM3O75607 MIR422A-201ENST00000362286 90 ntBASIC3.83□□□□□ -1.8
NPM3O75607 RNA5SP341-201ENST00000516261 117 ntBASIC3.83□□□□□ -1.8
NPM3O75607 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
NPM3O75607 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
NPM3O75607 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
NPM3O75607 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
NPM3O75607 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.82□□□□□ -1.8
NPM3O75607 SNORD67-201ENST00000390833 111 ntBASIC3.82□□□□□ -1.8
NPM3O75607 RPL23AP42-201ENST00000471152 471 ntBASIC3.82□□□□□ -1.8
NPM3O75607 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.82□□□□□ -1.8
NPM3O75607 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
NPM3O75607 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
NPM3O75607 VTRNA1-1-201ENST00000363120 99 ntBASIC3.81□□□□□ -1.8
NPM3O75607 AL162274.2-201ENST00000614406 332 ntBASIC3.81□□□□□ -1.8
NPM3O75607 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
NPM3O75607 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
NPM3O75607 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
NPM3O75607 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
NPM3O75607 RNA5SP215-201ENST00000363440 122 ntBASIC3.8□□□□□ -1.8
NPM3O75607 RNU6-645P-201ENST00000364649 106 ntBASIC3.8□□□□□ -1.8
NPM3O75607 MIR8063-201ENST00000621930 81 ntBASIC3.8□□□□□ -1.8
NPM3O75607 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
NPM3O75607 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
NPM3O75607 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
NPM3O75607 RNA5SP276-201ENST00000362580 94 ntBASIC3.79□□□□□ -1.8
NPM3O75607 Y_RNA.330-201ENST00000365230 109 ntBASIC3.79□□□□□ -1.8
NPM3O75607 MIR7-2-201ENST00000384970 110 ntBASIC3.79□□□□□ -1.8
NPM3O75607 AC055731.1-201ENST00000474387 401 ntBASIC3.79□□□□□ -1.8
NPM3O75607 MIR2276-201ENST00000516886 89 ntBASIC3.79□□□□□ -1.8
NPM3O75607 NAMPTP3-201ENST00000569273 224 ntBASIC3.79□□□□□ -1.8
NPM3O75607 MIR7978-201ENST00000636158 59 ntBASIC3.79□□□□□ -1.8
NPM3O75607 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
NPM3O75607 SNORA44-201ENST00000384584 132 ntBASIC3.78□□□□□ -1.8
NPM3O75607 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
NPM3O75607 RPS26P5-201ENST00000418544 335 ntBASIC3.78□□□□□ -1.8
NPM3O75607 RN7SL442P-201ENST00000473804 320 ntBASIC3.78□□□□□ -1.8
NPM3O75607 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
NPM3O75607 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
NPM3O75607 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.8
NPM3O75607 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
NPM3O75607 MIR203A-201ENST00000384836 110 ntBASIC3.77□□□□□ -1.81
NPM3O75607 MIR938-201ENST00000401216 83 ntBASIC3.77□□□□□ -1.81
NPM3O75607 AL513328.1-201ENST00000446460 224 ntBASIC3.77□□□□□ -1.81
NPM3O75607 AC008885.1-201ENST00000514930 301 ntBASIC3.77□□□□□ -1.81
NPM3O75607 MIR4676-201ENST00000583078 72 ntBASIC3.77□□□□□ -1.81
NPM3O75607 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
NPM3O75607 RNA5SP117-201ENST00000365294 118 ntBASIC3.76□□□□□ -1.81
NPM3O75607 RNU6-1126P-201ENST00000384002 107 ntBASIC3.76□□□□□ -1.81
NPM3O75607 SNORA54-201ENST00000384281 123 ntBASIC3.76□□□□□ -1.81
NPM3O75607 MIR524-201ENST00000385242 87 ntBASIC3.76□□□□□ -1.81
NPM3O75607 RNA5SP299-201ENST00000391203 116 ntBASIC3.76□□□□□ -1.81
NPM3O75607 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.76□□□□□ -1.81
NPM3O75607 AC036111.3-201ENST00000526389 112 ntBASIC3.76□□□□□ -1.81
NPM3O75607 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.76□□□□□ -1.81
NPM3O75607 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
NPM3O75607 SNORD33-201ENST00000362761 85 ntBASIC3.75□□□□□ -1.81
NPM3O75607 SNORD111-201ENST00000408139 94 ntBASIC3.75□□□□□ -1.81
NPM3O75607 AC027335.2-201ENST00000624030 375 ntBASIC3.75□□□□□ -1.81
NPM3O75607 AC073476.4-201ENST00000628409 72 ntBASIC3.75□□□□□ -1.81
NPM3O75607 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.75□□□□□ -1.81
NPM3O75607 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
NPM3O75607 SNORA80A-201ENST00000363922 136 ntBASIC3.74□□□□□ -1.81
NPM3O75607 RNU6-302P-201ENST00000365249 107 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 248.4 ms