Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CTC1Q2NKJ3 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.93□□□□□ -1.94
CTC1Q2NKJ3 RNU1-58P-201ENST00000362413 163 ntBASIC2.93□□□□□ -1.94
CTC1Q2NKJ3 AL357312.1-201ENST00000603879 298 ntBASIC2.93□□□□□ -1.94
CTC1Q2NKJ3 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.93□□□□□ -1.94
CTC1Q2NKJ3 AC103706.3-201ENST00000636297 85 ntBASIC2.93□□□□□ -1.94
CTC1Q2NKJ3 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
CTC1Q2NKJ3 AC108206.1-201ENST00000570186 4159 ntBASIC2.93□□□□□ -1.94
CTC1Q2NKJ3 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CTC1Q2NKJ3 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
CTC1Q2NKJ3 U8.2-201ENST00000363156 134 ntBASIC2.92□□□□□ -1.94
CTC1Q2NKJ3 RNU6-957P-201ENST00000363652 99 ntBASIC2.92□□□□□ -1.94
CTC1Q2NKJ3 RNU6-340P-201ENST00000364005 107 ntBASIC2.92□□□□□ -1.94
CTC1Q2NKJ3 RNU6-949P-201ENST00000384040 107 ntBASIC2.92□□□□□ -1.94
CTC1Q2NKJ3 SNORD38B-201ENST00000384690 67 ntBASIC2.92□□□□□ -1.94
CTC1Q2NKJ3 MIR518E-201ENST00000385252 88 ntBASIC2.92□□□□□ -1.94
CTC1Q2NKJ3 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
CTC1Q2NKJ3 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.92□□□□□ -1.94
CTC1Q2NKJ3 RNU7-26P-201ENST00000458980 63 ntBASIC2.92□□□□□ -1.94
CTC1Q2NKJ3 MIR2113-201ENST00000459007 91 ntBASIC2.92□□□□□ -1.94
CTC1Q2NKJ3 MIR3675-201ENST00000583661 73 ntBASIC2.92□□□□□ -1.94
CTC1Q2NKJ3 AC008133.2-201ENST00000624540 351 ntBASIC2.92□□□□□ -1.94
CTC1Q2NKJ3 SNORD38B-202ENST00000625943 69 ntBASIC2.92□□□□□ -1.94
CTC1Q2NKJ3 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
CTC1Q2NKJ3 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CTC1Q2NKJ3 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC2.91□□□□□ -1.94
CTC1Q2NKJ3 Y_RNA.119-201ENST00000363301 96 ntBASIC2.91□□□□□ -1.94
CTC1Q2NKJ3 SNORA74.3-201ENST00000517108 154 ntBASIC2.91□□□□□ -1.94
CTC1Q2NKJ3 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.91□□□□□ -1.94
CTC1Q2NKJ3 SNORD45.1-201ENST00000363181 77 ntBASIC2.9□□□□□ -1.95
CTC1Q2NKJ3 Y_RNA.207-201ENST00000364142 106 ntBASIC2.9□□□□□ -1.95
CTC1Q2NKJ3 SNORD116-24-201ENST00000384549 92 ntBASIC2.9□□□□□ -1.95
CTC1Q2NKJ3 RNU6-950P-201ENST00000384651 107 ntBASIC2.9□□□□□ -1.95
CTC1Q2NKJ3 RNA5SP445-201ENST00000515889 115 ntBASIC2.9□□□□□ -1.95
CTC1Q2NKJ3 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.9□□□□□ -1.95
CTC1Q2NKJ3 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.95
CTC1Q2NKJ3 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
CTC1Q2NKJ3 WWP1P1-201ENST00000466609 2769 ntBASIC2.89□□□□□ -1.95
CTC1Q2NKJ3 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.89□□□□□ -1.95
CTC1Q2NKJ3 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CTC1Q2NKJ3 Y_RNA.42-201ENST00000362660 108 ntBASIC2.89□□□□□ -1.95
CTC1Q2NKJ3 SNORD115-22-201ENST00000364456 82 ntBASIC2.89□□□□□ -1.95
CTC1Q2NKJ3 RNU6-1051P-201ENST00000365471 102 ntBASIC2.89□□□□□ -1.95
CTC1Q2NKJ3 RNU1-109P-201ENST00000383960 147 ntBASIC2.89□□□□□ -1.95
CTC1Q2NKJ3 RNU6ATAC42P-201ENST00000408637 95 ntBASIC2.89□□□□□ -1.95
CTC1Q2NKJ3 AC009487.2-201ENST00000420969 6821 ntBASIC2.89□□□□□ -1.95
CTC1Q2NKJ3 AC245517.4-201ENST00000448601 281 ntBASIC2.89□□□□□ -1.95
CTC1Q2NKJ3 RNA5SP137-201ENST00000516833 135 ntBASIC2.89□□□□□ -1.95
CTC1Q2NKJ3 AL109933.3-201ENST00000619095 188 ntBASIC2.89□□□□□ -1.95
CTC1Q2NKJ3 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
CTC1Q2NKJ3 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
CTC1Q2NKJ3 HMGN2P39-201ENST00000398005 273 ntBASIC2.88□□□□□ -1.95
CTC1Q2NKJ3 snoU13.23-201ENST00000458863 104 ntBASIC2.88□□□□□ -1.95
CTC1Q2NKJ3 RNU7-106P-201ENST00000459514 67 ntBASIC2.88□□□□□ -1.95
CTC1Q2NKJ3 SCARNA16.3-201ENST00000516595 184 ntBASIC2.88□□□□□ -1.95
CTC1Q2NKJ3 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CTC1Q2NKJ3 RNU6-1216P-201ENST00000362590 107 ntBASIC2.87□□□□□ -1.95
CTC1Q2NKJ3 RNU6-829P-201ENST00000363700 112 ntBASIC2.87□□□□□ -1.95
CTC1Q2NKJ3 Y_RNA.236-201ENST00000364427 111 ntBASIC2.87□□□□□ -1.95
CTC1Q2NKJ3 U4.3-201ENST00000621047 82 ntBASIC2.87□□□□□ -1.95
CTC1Q2NKJ3 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CTC1Q2NKJ3 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.87□□□□□ -1.95
CTC1Q2NKJ3 AL161431.1-201ENST00000618966 4205 ntBASIC2.87□□□□□ -1.95
CTC1Q2NKJ3 RNU6-669P-201ENST00000365575 107 ntBASIC2.86□□□□□ -1.95
CTC1Q2NKJ3 RNU1-148P-201ENST00000384472 162 ntBASIC2.86□□□□□ -1.95
CTC1Q2NKJ3 AL023284.1-201ENST00000403956 276 ntBASIC2.86□□□□□ -1.95
CTC1Q2NKJ3 HMGN2P35-201ENST00000412164 270 ntBASIC2.86□□□□□ -1.95
CTC1Q2NKJ3 AC021506.2-201ENST00000612354 169 ntBASIC2.86□□□□□ -1.95
CTC1Q2NKJ3 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
CTC1Q2NKJ3 MIR660-201ENST00000385235 97 ntBASIC2.85□□□□□ -1.95
CTC1Q2NKJ3 RNU7-43P-201ENST00000516554 64 ntBASIC2.85□□□□□ -1.95
CTC1Q2NKJ3 AL627230.6-201ENST00000611129 280 ntBASIC2.85□□□□□ -1.95
CTC1Q2NKJ3 MIR8053-201ENST00000613344 75 ntBASIC2.85□□□□□ -1.95
CTC1Q2NKJ3 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.85□□□□□ -1.95
CTC1Q2NKJ3 SNORD113.1-201ENST00000363280 73 ntBASIC2.84□□□□□ -1.95
CTC1Q2NKJ3 RNA5SP282-201ENST00000516355 108 ntBASIC2.84□□□□□ -1.95
CTC1Q2NKJ3 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.84□□□□□ -1.95
CTC1Q2NKJ3 MIR3140-201ENST00000583685 90 ntBASIC2.84□□□□□ -1.95
CTC1Q2NKJ3 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.84□□□□□ -1.95
CTC1Q2NKJ3 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.83□□□□□ -1.96
CTC1Q2NKJ3 MIR520C-201ENST00000385005 87 ntBASIC2.83□□□□□ -1.96
CTC1Q2NKJ3 RNU6-604P-201ENST00000390917 100 ntBASIC2.83□□□□□ -1.96
CTC1Q2NKJ3 RNU11-3P-201ENST00000391111 133 ntBASIC2.83□□□□□ -1.96
CTC1Q2NKJ3 RNA5SP465-201ENST00000391195 109 ntBASIC2.83□□□□□ -1.96
CTC1Q2NKJ3 BX510359.4-201ENST00000423750 193 ntBASIC2.83□□□□□ -1.96
CTC1Q2NKJ3 SUB1P4-201ENST00000566062 339 ntBASIC2.83□□□□□ -1.96
CTC1Q2NKJ3 AL096861.1-201ENST00000610899 123 ntBASIC2.83□□□□□ -1.96
CTC1Q2NKJ3 AC069503.3-201ENST00000618674 145 ntBASIC2.83□□□□□ -1.96
CTC1Q2NKJ3 AL513423.1-201ENST00000621695 132 ntBASIC2.83□□□□□ -1.96
CTC1Q2NKJ3 MIR4251-201ENST00000635819 61 ntBASIC2.83□□□□□ -1.96
CTC1Q2NKJ3 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CTC1Q2NKJ3 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
CTC1Q2NKJ3 RNA5SP289-201ENST00000362332 137 ntBASIC2.82□□□□□ -1.96
CTC1Q2NKJ3 SNORA40.6-201ENST00000391153 128 ntBASIC2.82□□□□□ -1.96
CTC1Q2NKJ3 AL603825.1-201ENST00000438481 80 ntBASIC2.82□□□□□ -1.96
CTC1Q2NKJ3 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.82□□□□□ -1.96
CTC1Q2NKJ3 AC022202.1-201ENST00000613515 211 ntBASIC2.82□□□□□ -1.96
CTC1Q2NKJ3 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CTC1Q2NKJ3 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.81□□□□□ -1.96
CTC1Q2NKJ3 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 340.7 ms