Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC22.62■■□□□ 1.21
DDX49Q9Y6V7 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
DDX49Q9Y6V7 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC22.62■■□□□ 1.21
DDX49Q9Y6V7 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
DDX49Q9Y6V7 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
DDX49Q9Y6V7 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
DDX49Q9Y6V7 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC22.62■■□□□ 1.21
DDX49Q9Y6V7 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC22.62■■□□□ 1.21
DDX49Q9Y6V7 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
DDX49Q9Y6V7 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
DDX49Q9Y6V7 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
DDX49Q9Y6V7 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC22.62■■□□□ 1.21
DDX49Q9Y6V7 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC22.62■■□□□ 1.21
DDX49Q9Y6V7 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC22.62■■□□□ 1.21
DDX49Q9Y6V7 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
DDX49Q9Y6V7 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
DDX49Q9Y6V7 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
DDX49Q9Y6V7 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
DDX49Q9Y6V7 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
DDX49Q9Y6V7 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC22.62■■□□□ 1.21
DDX49Q9Y6V7 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
DDX49Q9Y6V7 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC22.62■■□□□ 1.21
DDX49Q9Y6V7 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
DDX49Q9Y6V7 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
DDX49Q9Y6V7 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC22.62■■□□□ 1.21
DDX49Q9Y6V7 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC22.61■■□□□ 1.21
DDX49Q9Y6V7 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC22.61■■□□□ 1.21
DDX49Q9Y6V7 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC22.61■■□□□ 1.21
DDX49Q9Y6V7 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
DDX49Q9Y6V7 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC22.61■■□□□ 1.21
DDX49Q9Y6V7 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
DDX49Q9Y6V7 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
DDX49Q9Y6V7 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
DDX49Q9Y6V7 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
DDX49Q9Y6V7 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
DDX49Q9Y6V7 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
DDX49Q9Y6V7 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC22.61■■□□□ 1.21
DDX49Q9Y6V7 KRT8P20-201ENST00000423953 1409 ntBASIC22.61■■□□□ 1.21
DDX49Q9Y6V7 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC22.61■■□□□ 1.21
DDX49Q9Y6V7 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC22.61■■□□□ 1.21
DDX49Q9Y6V7 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC22.61■■□□□ 1.21
DDX49Q9Y6V7 MAX-217ENST00000557277 728 ntTSL 3 BASIC22.61■■□□□ 1.21
DDX49Q9Y6V7 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC22.61■■□□□ 1.21
DDX49Q9Y6V7 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC22.61■■□□□ 1.21
DDX49Q9Y6V7 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
DDX49Q9Y6V7 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC22.61■■□□□ 1.21
DDX49Q9Y6V7 AC012306.2-201ENST00000609350 630 ntBASIC22.61■■□□□ 1.21
DDX49Q9Y6V7 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
DDX49Q9Y6V7 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
DDX49Q9Y6V7 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
DDX49Q9Y6V7 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC22.61■■□□□ 1.21
DDX49Q9Y6V7 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC22.61■■□□□ 1.21
DDX49Q9Y6V7 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC22.61■■□□□ 1.21
DDX49Q9Y6V7 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
DDX49Q9Y6V7 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
DDX49Q9Y6V7 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
DDX49Q9Y6V7 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
DDX49Q9Y6V7 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
DDX49Q9Y6V7 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
DDX49Q9Y6V7 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
DDX49Q9Y6V7 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC22.6■■□□□ 1.21
DDX49Q9Y6V7 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
DDX49Q9Y6V7 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
DDX49Q9Y6V7 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC22.6■■□□□ 1.21
DDX49Q9Y6V7 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
DDX49Q9Y6V7 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
DDX49Q9Y6V7 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
DDX49Q9Y6V7 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
DDX49Q9Y6V7 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
DDX49Q9Y6V7 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
DDX49Q9Y6V7 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC22.6■■□□□ 1.21
DDX49Q9Y6V7 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
DDX49Q9Y6V7 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
DDX49Q9Y6V7 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC22.59■■□□□ 1.21
DDX49Q9Y6V7 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
DDX49Q9Y6V7 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
DDX49Q9Y6V7 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
DDX49Q9Y6V7 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC22.59■■□□□ 1.21
DDX49Q9Y6V7 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
DDX49Q9Y6V7 HLA-G-202ENST00000376815 851 ntBASIC22.59■■□□□ 1.21
DDX49Q9Y6V7 HLA-G-203ENST00000376818 1127 ntBASIC22.59■■□□□ 1.21
DDX49Q9Y6V7 RCN1P1-201ENST00000400413 996 ntBASIC22.59■■□□□ 1.21
DDX49Q9Y6V7 AL355355.2-201ENST00000442321 338 ntBASIC22.59■■□□□ 1.21
DDX49Q9Y6V7 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
DDX49Q9Y6V7 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC22.59■■□□□ 1.21
DDX49Q9Y6V7 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC22.59■■□□□ 1.21
DDX49Q9Y6V7 AC010331.1-201ENST00000611423 582 ntBASIC22.59■■□□□ 1.21
DDX49Q9Y6V7 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC22.59■■□□□ 1.21
DDX49Q9Y6V7 AC090340.1-201ENST00000620778 4980 ntBASIC22.59■■□□□ 1.21
DDX49Q9Y6V7 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC22.59■■□□□ 1.21
DDX49Q9Y6V7 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC22.59■■□□□ 1.21
DDX49Q9Y6V7 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
DDX49Q9Y6V7 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
DDX49Q9Y6V7 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC22.59■■□□□ 1.21
DDX49Q9Y6V7 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC22.59■■□□□ 1.21
DDX49Q9Y6V7 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
DDX49Q9Y6V7 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
DDX49Q9Y6V7 SRI-203ENST00000419179 1307 ntTSL 2 BASIC22.58■■□□□ 1.21
DDX49Q9Y6V7 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
DDX49Q9Y6V7 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms