Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
AP4B1Q9Y6B7 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
AP4B1Q9Y6B7 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
AP4B1Q9Y6B7 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.09■□□□□ 0.49
AP4B1Q9Y6B7 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
AP4B1Q9Y6B7 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
AP4B1Q9Y6B7 PTBP1P-201ENST00000554374 1601 ntBASIC18.09■□□□□ 0.49
AP4B1Q9Y6B7 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
AP4B1Q9Y6B7 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
AP4B1Q9Y6B7 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
AP4B1Q9Y6B7 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.08■□□□□ 0.49
AP4B1Q9Y6B7 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
AP4B1Q9Y6B7 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
AP4B1Q9Y6B7 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
AP4B1Q9Y6B7 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.08■□□□□ 0.49
AP4B1Q9Y6B7 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
AP4B1Q9Y6B7 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.08■□□□□ 0.49
AP4B1Q9Y6B7 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
AP4B1Q9Y6B7 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
AP4B1Q9Y6B7 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
AP4B1Q9Y6B7 KRT8P20-201ENST00000423953 1409 ntBASIC18.08■□□□□ 0.49
AP4B1Q9Y6B7 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.49
AP4B1Q9Y6B7 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.08■□□□□ 0.49
AP4B1Q9Y6B7 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
AP4B1Q9Y6B7 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
AP4B1Q9Y6B7 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
AP4B1Q9Y6B7 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
AP4B1Q9Y6B7 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
AP4B1Q9Y6B7 ABHD17AP1-201ENST00000358206 933 ntBASIC18.08■□□□□ 0.48
AP4B1Q9Y6B7 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.08■□□□□ 0.48
AP4B1Q9Y6B7 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
AP4B1Q9Y6B7 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
AP4B1Q9Y6B7 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.08■□□□□ 0.48
AP4B1Q9Y6B7 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.08■□□□□ 0.48
AP4B1Q9Y6B7 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.08■□□□□ 0.48
AP4B1Q9Y6B7 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
AP4B1Q9Y6B7 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.08■□□□□ 0.48
AP4B1Q9Y6B7 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.08■□□□□ 0.48
AP4B1Q9Y6B7 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
AP4B1Q9Y6B7 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
AP4B1Q9Y6B7 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
AP4B1Q9Y6B7 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
AP4B1Q9Y6B7 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.08■□□□□ 0.48
AP4B1Q9Y6B7 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
AP4B1Q9Y6B7 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
AP4B1Q9Y6B7 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
AP4B1Q9Y6B7 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
AP4B1Q9Y6B7 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.07■□□□□ 0.48
AP4B1Q9Y6B7 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
AP4B1Q9Y6B7 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
AP4B1Q9Y6B7 KRT16P6-202ENST00000425692 1426 ntBASIC18.07■□□□□ 0.48
AP4B1Q9Y6B7 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
AP4B1Q9Y6B7 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
AP4B1Q9Y6B7 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
AP4B1Q9Y6B7 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
AP4B1Q9Y6B7 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
AP4B1Q9Y6B7 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
AP4B1Q9Y6B7 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
AP4B1Q9Y6B7 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
AP4B1Q9Y6B7 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
AP4B1Q9Y6B7 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.07■□□□□ 0.48
AP4B1Q9Y6B7 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
AP4B1Q9Y6B7 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.07■□□□□ 0.48
AP4B1Q9Y6B7 AC008687.6-201ENST00000596318 630 ntBASIC18.07■□□□□ 0.48
AP4B1Q9Y6B7 AC008403.3-201ENST00000598924 454 ntBASIC18.07■□□□□ 0.48
AP4B1Q9Y6B7 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.07■□□□□ 0.48
AP4B1Q9Y6B7 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.07■□□□□ 0.48
AP4B1Q9Y6B7 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
AP4B1Q9Y6B7 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
AP4B1Q9Y6B7 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
AP4B1Q9Y6B7 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.07■□□□□ 0.48
AP4B1Q9Y6B7 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
AP4B1Q9Y6B7 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
AP4B1Q9Y6B7 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
AP4B1Q9Y6B7 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
AP4B1Q9Y6B7 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
AP4B1Q9Y6B7 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.06■□□□□ 0.48
AP4B1Q9Y6B7 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
AP4B1Q9Y6B7 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
AP4B1Q9Y6B7 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.06■□□□□ 0.48
AP4B1Q9Y6B7 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.06■□□□□ 0.48
AP4B1Q9Y6B7 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
AP4B1Q9Y6B7 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
AP4B1Q9Y6B7 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.06■□□□□ 0.48
AP4B1Q9Y6B7 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
AP4B1Q9Y6B7 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
AP4B1Q9Y6B7 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.06■□□□□ 0.48
AP4B1Q9Y6B7 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.06■□□□□ 0.48
AP4B1Q9Y6B7 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
AP4B1Q9Y6B7 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
AP4B1Q9Y6B7 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
AP4B1Q9Y6B7 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
AP4B1Q9Y6B7 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
AP4B1Q9Y6B7 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.06■□□□□ 0.48
AP4B1Q9Y6B7 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
AP4B1Q9Y6B7 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.06■□□□□ 0.48
AP4B1Q9Y6B7 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
AP4B1Q9Y6B7 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
AP4B1Q9Y6B7 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
AP4B1Q9Y6B7 KRT17P3-201ENST00000420566 1262 ntBASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms