Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
COL4A3BPQ9Y5P4 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
COL4A3BPQ9Y5P4 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC21.09■□□□□ 0.97
COL4A3BPQ9Y5P4 AC010331.1-201ENST00000611423 582 ntBASIC21.09■□□□□ 0.97
COL4A3BPQ9Y5P4 AC010653.2-201ENST00000623505 997 ntBASIC21.09■□□□□ 0.97
COL4A3BPQ9Y5P4 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL4A3BPQ9Y5P4 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC21.09■□□□□ 0.97
COL4A3BPQ9Y5P4 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL4A3BPQ9Y5P4 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL4A3BPQ9Y5P4 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
COL4A3BPQ9Y5P4 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
COL4A3BPQ9Y5P4 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
COL4A3BPQ9Y5P4 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
COL4A3BPQ9Y5P4 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
COL4A3BPQ9Y5P4 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
COL4A3BPQ9Y5P4 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
COL4A3BPQ9Y5P4 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
COL4A3BPQ9Y5P4 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
COL4A3BPQ9Y5P4 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC21.08■□□□□ 0.97
COL4A3BPQ9Y5P4 LIN28AP1-201ENST00000429574 405 ntBASIC21.08■□□□□ 0.97
COL4A3BPQ9Y5P4 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC21.08■□□□□ 0.97
COL4A3BPQ9Y5P4 AL353719.1-201ENST00000566847 864 ntBASIC21.08■□□□□ 0.97
COL4A3BPQ9Y5P4 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC21.08■□□□□ 0.97
COL4A3BPQ9Y5P4 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
COL4A3BPQ9Y5P4 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC21.08■□□□□ 0.97
COL4A3BPQ9Y5P4 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC21.08■□□□□ 0.96
COL4A3BPQ9Y5P4 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
COL4A3BPQ9Y5P4 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
COL4A3BPQ9Y5P4 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
COL4A3BPQ9Y5P4 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
COL4A3BPQ9Y5P4 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
COL4A3BPQ9Y5P4 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
COL4A3BPQ9Y5P4 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC21.08■□□□□ 0.96
COL4A3BPQ9Y5P4 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
COL4A3BPQ9Y5P4 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
COL4A3BPQ9Y5P4 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
COL4A3BPQ9Y5P4 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL4A3BPQ9Y5P4 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC21.07■□□□□ 0.96
COL4A3BPQ9Y5P4 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC21.07■□□□□ 0.96
COL4A3BPQ9Y5P4 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL4A3BPQ9Y5P4 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC21.07■□□□□ 0.96
COL4A3BPQ9Y5P4 ATP5G1P1-201ENST00000448724 379 ntBASIC21.07■□□□□ 0.96
COL4A3BPQ9Y5P4 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC21.07■□□□□ 0.96
COL4A3BPQ9Y5P4 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC21.07■□□□□ 0.96
COL4A3BPQ9Y5P4 CFL2-205ENST00000555765 632 ntTSL 2 BASIC21.07■□□□□ 0.96
COL4A3BPQ9Y5P4 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC21.07■□□□□ 0.96
COL4A3BPQ9Y5P4 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
COL4A3BPQ9Y5P4 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL4A3BPQ9Y5P4 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL4A3BPQ9Y5P4 AC120498.9-201ENST00000339021 3867 ntBASIC21.07■□□□□ 0.96
COL4A3BPQ9Y5P4 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
COL4A3BPQ9Y5P4 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC21.07■□□□□ 0.96
COL4A3BPQ9Y5P4 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL4A3BPQ9Y5P4 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
COL4A3BPQ9Y5P4 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
COL4A3BPQ9Y5P4 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC21.06■□□□□ 0.96
COL4A3BPQ9Y5P4 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
COL4A3BPQ9Y5P4 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC21.06■□□□□ 0.96
COL4A3BPQ9Y5P4 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
COL4A3BPQ9Y5P4 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
COL4A3BPQ9Y5P4 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
COL4A3BPQ9Y5P4 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
COL4A3BPQ9Y5P4 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
COL4A3BPQ9Y5P4 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC21.06■□□□□ 0.96
COL4A3BPQ9Y5P4 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
COL4A3BPQ9Y5P4 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
COL4A3BPQ9Y5P4 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC21.06■□□□□ 0.96
COL4A3BPQ9Y5P4 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
COL4A3BPQ9Y5P4 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC21.06■□□□□ 0.96
COL4A3BPQ9Y5P4 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC21.06■□□□□ 0.96
COL4A3BPQ9Y5P4 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
COL4A3BPQ9Y5P4 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
COL4A3BPQ9Y5P4 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
COL4A3BPQ9Y5P4 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
COL4A3BPQ9Y5P4 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
COL4A3BPQ9Y5P4 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC21.06■□□□□ 0.96
COL4A3BPQ9Y5P4 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
COL4A3BPQ9Y5P4 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
COL4A3BPQ9Y5P4 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
COL4A3BPQ9Y5P4 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
COL4A3BPQ9Y5P4 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC21.05■□□□□ 0.96
COL4A3BPQ9Y5P4 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
COL4A3BPQ9Y5P4 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
COL4A3BPQ9Y5P4 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
COL4A3BPQ9Y5P4 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
COL4A3BPQ9Y5P4 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
COL4A3BPQ9Y5P4 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
COL4A3BPQ9Y5P4 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
COL4A3BPQ9Y5P4 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
COL4A3BPQ9Y5P4 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
COL4A3BPQ9Y5P4 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
COL4A3BPQ9Y5P4 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC21.05■□□□□ 0.96
COL4A3BPQ9Y5P4 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
COL4A3BPQ9Y5P4 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC21.05■□□□□ 0.96
COL4A3BPQ9Y5P4 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC21.05■□□□□ 0.96
COL4A3BPQ9Y5P4 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
COL4A3BPQ9Y5P4 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
COL4A3BPQ9Y5P4 LGALS8-AS1-201ENST00000487567 1457 ntBASIC21.05■□□□□ 0.96
COL4A3BPQ9Y5P4 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC21.05■□□□□ 0.96
COL4A3BPQ9Y5P4 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms