Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGA3Q9Y5H0 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGA3Q9Y5H0 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
PCDHGA3Q9Y5H0 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGA3Q9Y5H0 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PCDHGA3Q9Y5H0 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGA3Q9Y5H0 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGA3Q9Y5H0 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGA3Q9Y5H0 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGA3Q9Y5H0 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.3■□□□□ 0.52
PCDHGA3Q9Y5H0 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGA3Q9Y5H0 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.3■□□□□ 0.52
PCDHGA3Q9Y5H0 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.3■□□□□ 0.52
PCDHGA3Q9Y5H0 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.3■□□□□ 0.52
PCDHGA3Q9Y5H0 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.3■□□□□ 0.52
PCDHGA3Q9Y5H0 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGA3Q9Y5H0 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.3■□□□□ 0.52
PCDHGA3Q9Y5H0 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PCDHGA3Q9Y5H0 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
PCDHGA3Q9Y5H0 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGA3Q9Y5H0 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
PCDHGA3Q9Y5H0 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGA3Q9Y5H0 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PCDHGA3Q9Y5H0 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGA3Q9Y5H0 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGA3Q9Y5H0 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGA3Q9Y5H0 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGA3Q9Y5H0 KRT8P41-201ENST00000533985 1514 ntBASIC18.29■□□□□ 0.52
PCDHGA3Q9Y5H0 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGA3Q9Y5H0 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGA3Q9Y5H0 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
PCDHGA3Q9Y5H0 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGA3Q9Y5H0 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.29■□□□□ 0.52
PCDHGA3Q9Y5H0 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.29■□□□□ 0.52
PCDHGA3Q9Y5H0 AC005332.7-201ENST00000614046 2005 ntBASIC18.29■□□□□ 0.52
PCDHGA3Q9Y5H0 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGA3Q9Y5H0 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGA3Q9Y5H0 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGA3Q9Y5H0 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGA3Q9Y5H0 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGA3Q9Y5H0 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.29■□□□□ 0.52
PCDHGA3Q9Y5H0 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.29■□□□□ 0.52
PCDHGA3Q9Y5H0 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.29■□□□□ 0.52
PCDHGA3Q9Y5H0 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.29■□□□□ 0.52
PCDHGA3Q9Y5H0 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.29■□□□□ 0.52
PCDHGA3Q9Y5H0 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.29■□□□□ 0.52
PCDHGA3Q9Y5H0 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.29■□□□□ 0.52
PCDHGA3Q9Y5H0 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.29■□□□□ 0.52
PCDHGA3Q9Y5H0 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.29■□□□□ 0.52
PCDHGA3Q9Y5H0 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.29■□□□□ 0.52
PCDHGA3Q9Y5H0 AL121956.5-201ENST00000625261 221 ntBASIC18.29■□□□□ 0.52
PCDHGA3Q9Y5H0 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.29■□□□□ 0.52
PCDHGA3Q9Y5H0 AP000550.4-202ENST00000639755 178 ntBASIC18.29■□□□□ 0.52
PCDHGA3Q9Y5H0 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGA3Q9Y5H0 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGA3Q9Y5H0 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGA3Q9Y5H0 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGA3Q9Y5H0 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGA3Q9Y5H0 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGA3Q9Y5H0 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.29■□□□□ 0.52
PCDHGA3Q9Y5H0 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGA3Q9Y5H0 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
PCDHGA3Q9Y5H0 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.28■□□□□ 0.52
PCDHGA3Q9Y5H0 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGA3Q9Y5H0 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.28■□□□□ 0.52
PCDHGA3Q9Y5H0 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.28■□□□□ 0.52
PCDHGA3Q9Y5H0 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.28■□□□□ 0.52
PCDHGA3Q9Y5H0 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGA3Q9Y5H0 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
PCDHGA3Q9Y5H0 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGA3Q9Y5H0 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
PCDHGA3Q9Y5H0 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGA3Q9Y5H0 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGA3Q9Y5H0 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.28■□□□□ 0.52
PCDHGA3Q9Y5H0 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
PCDHGA3Q9Y5H0 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.28■□□□□ 0.52
PCDHGA3Q9Y5H0 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGA3Q9Y5H0 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGA3Q9Y5H0 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGA3Q9Y5H0 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.28■□□□□ 0.52
PCDHGA3Q9Y5H0 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGA3Q9Y5H0 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGA3Q9Y5H0 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGA3Q9Y5H0 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.27■□□□□ 0.52
PCDHGA3Q9Y5H0 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGA3Q9Y5H0 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.27■□□□□ 0.52
PCDHGA3Q9Y5H0 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
PCDHGA3Q9Y5H0 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.27■□□□□ 0.52
PCDHGA3Q9Y5H0 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGA3Q9Y5H0 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
PCDHGA3Q9Y5H0 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
PCDHGA3Q9Y5H0 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
PCDHGA3Q9Y5H0 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.27■□□□□ 0.52
PCDHGA3Q9Y5H0 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGA3Q9Y5H0 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGA3Q9Y5H0 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGA3Q9Y5H0 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGA3Q9Y5H0 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.27■□□□□ 0.52
PCDHGA3Q9Y5H0 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGA3Q9Y5H0 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms