Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB11Q9Y5F2 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB11Q9Y5F2 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHB11Q9Y5F2 AC141586.3-201ENST00000562166 1838 ntBASIC18.46■□□□□ 0.55
PCDHB11Q9Y5F2 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHB11Q9Y5F2 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.46■□□□□ 0.55
PCDHB11Q9Y5F2 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
PCDHB11Q9Y5F2 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHB11Q9Y5F2 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
PCDHB11Q9Y5F2 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHB11Q9Y5F2 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHB11Q9Y5F2 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.46■□□□□ 0.55
PCDHB11Q9Y5F2 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.46■□□□□ 0.55
PCDHB11Q9Y5F2 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.46■□□□□ 0.55
PCDHB11Q9Y5F2 UPK3BP1-201ENST00000428678 509 ntBASIC18.46■□□□□ 0.55
PCDHB11Q9Y5F2 SLC25A1P2-201ENST00000430693 912 ntBASIC18.46■□□□□ 0.55
PCDHB11Q9Y5F2 TSPY23P-201ENST00000440136 739 ntBASIC18.46■□□□□ 0.55
PCDHB11Q9Y5F2 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHB11Q9Y5F2 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.46■□□□□ 0.55
PCDHB11Q9Y5F2 AC063952.2-201ENST00000498792 1227 ntBASIC18.46■□□□□ 0.55
PCDHB11Q9Y5F2 PRSS44-201ENST00000515154 1146 ntBASIC18.46■□□□□ 0.55
PCDHB11Q9Y5F2 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.46■□□□□ 0.55
PCDHB11Q9Y5F2 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.46■□□□□ 0.55
PCDHB11Q9Y5F2 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHB11Q9Y5F2 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.46■□□□□ 0.55
PCDHB11Q9Y5F2 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHB11Q9Y5F2 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHB11Q9Y5F2 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.46■□□□□ 0.55
PCDHB11Q9Y5F2 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.46■□□□□ 0.55
PCDHB11Q9Y5F2 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHB11Q9Y5F2 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHB11Q9Y5F2 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHB11Q9Y5F2 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHB11Q9Y5F2 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHB11Q9Y5F2 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHB11Q9Y5F2 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
PCDHB11Q9Y5F2 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHB11Q9Y5F2 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHB11Q9Y5F2 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHB11Q9Y5F2 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.45■□□□□ 0.54
PCDHB11Q9Y5F2 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHB11Q9Y5F2 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHB11Q9Y5F2 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHB11Q9Y5F2 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHB11Q9Y5F2 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.45■□□□□ 0.54
PCDHB11Q9Y5F2 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.45■□□□□ 0.54
PCDHB11Q9Y5F2 AC092647.4-201ENST00000457211 535 ntBASIC18.45■□□□□ 0.54
PCDHB11Q9Y5F2 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.45■□□□□ 0.54
PCDHB11Q9Y5F2 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHB11Q9Y5F2 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.45■□□□□ 0.54
PCDHB11Q9Y5F2 FAM87A-204ENST00000613235 858 ntBASIC18.45■□□□□ 0.54
PCDHB11Q9Y5F2 KRT8P11-201ENST00000409686 1436 ntBASIC18.45■□□□□ 0.54
PCDHB11Q9Y5F2 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
PCDHB11Q9Y5F2 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
PCDHB11Q9Y5F2 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHB11Q9Y5F2 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHB11Q9Y5F2 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
PCDHB11Q9Y5F2 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHB11Q9Y5F2 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.45■□□□□ 0.54
PCDHB11Q9Y5F2 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.45■□□□□ 0.54
PCDHB11Q9Y5F2 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.45■□□□□ 0.54
PCDHB11Q9Y5F2 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHB11Q9Y5F2 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHB11Q9Y5F2 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHB11Q9Y5F2 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
PCDHB11Q9Y5F2 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
PCDHB11Q9Y5F2 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.44■□□□□ 0.54
PCDHB11Q9Y5F2 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHB11Q9Y5F2 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
PCDHB11Q9Y5F2 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHB11Q9Y5F2 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHB11Q9Y5F2 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
PCDHB11Q9Y5F2 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHB11Q9Y5F2 RNF152P1-201ENST00000397754 604 ntBASIC18.44■□□□□ 0.54
PCDHB11Q9Y5F2 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDHB11Q9Y5F2 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHB11Q9Y5F2 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.44■□□□□ 0.54
PCDHB11Q9Y5F2 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC18.44■□□□□ 0.54
PCDHB11Q9Y5F2 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.44■□□□□ 0.54
PCDHB11Q9Y5F2 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.44■□□□□ 0.54
PCDHB11Q9Y5F2 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
PCDHB11Q9Y5F2 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHB11Q9Y5F2 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDHB11Q9Y5F2 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHB11Q9Y5F2 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
PCDHB11Q9Y5F2 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
PCDHB11Q9Y5F2 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHB11Q9Y5F2 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHB11Q9Y5F2 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDHB11Q9Y5F2 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHB11Q9Y5F2 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHB11Q9Y5F2 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHB11Q9Y5F2 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHB11Q9Y5F2 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHB11Q9Y5F2 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHB11Q9Y5F2 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.43■□□□□ 0.54
PCDHB11Q9Y5F2 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.43■□□□□ 0.54
PCDHB11Q9Y5F2 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHB11Q9Y5F2 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHB11Q9Y5F2 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms