Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
RNF11Q9Y3C5 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF11Q9Y3C5 AC093525.10-201ENST00000625130 1569 ntBASIC18.39■□□□□ 0.53
RNF11Q9Y3C5 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF11Q9Y3C5 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.39■□□□□ 0.53
RNF11Q9Y3C5 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
RNF11Q9Y3C5 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF11Q9Y3C5 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF11Q9Y3C5 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.39■□□□□ 0.53
RNF11Q9Y3C5 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.39■□□□□ 0.53
RNF11Q9Y3C5 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
RNF11Q9Y3C5 RPPH1-201ENST00000516869 333 ntBASIC18.39■□□□□ 0.53
RNF11Q9Y3C5 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.39■□□□□ 0.53
RNF11Q9Y3C5 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.39■□□□□ 0.53
RNF11Q9Y3C5 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.39■□□□□ 0.53
RNF11Q9Y3C5 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF11Q9Y3C5 HTR7P1-201ENST00000538670 1336 ntBASIC18.39■□□□□ 0.53
RNF11Q9Y3C5 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.39■□□□□ 0.53
RNF11Q9Y3C5 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF11Q9Y3C5 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
RNF11Q9Y3C5 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RNF11Q9Y3C5 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
RNF11Q9Y3C5 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
RNF11Q9Y3C5 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF11Q9Y3C5 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF11Q9Y3C5 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
RNF11Q9Y3C5 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF11Q9Y3C5 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.38■□□□□ 0.53
RNF11Q9Y3C5 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF11Q9Y3C5 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF11Q9Y3C5 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF11Q9Y3C5 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.38■□□□□ 0.53
RNF11Q9Y3C5 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF11Q9Y3C5 NIFKP9-201ENST00000419265 221 ntBASIC18.38■□□□□ 0.53
RNF11Q9Y3C5 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF11Q9Y3C5 RPS2P4-201ENST00000476944 856 ntBASIC18.38■□□□□ 0.53
RNF11Q9Y3C5 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF11Q9Y3C5 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.38■□□□□ 0.53
RNF11Q9Y3C5 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.38■□□□□ 0.53
RNF11Q9Y3C5 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF11Q9Y3C5 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.38■□□□□ 0.53
RNF11Q9Y3C5 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.38■□□□□ 0.53
RNF11Q9Y3C5 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF11Q9Y3C5 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF11Q9Y3C5 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.38■□□□□ 0.53
RNF11Q9Y3C5 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
RNF11Q9Y3C5 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
RNF11Q9Y3C5 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF11Q9Y3C5 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RNF11Q9Y3C5 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF11Q9Y3C5 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF11Q9Y3C5 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.38■□□□□ 0.53
RNF11Q9Y3C5 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
RNF11Q9Y3C5 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF11Q9Y3C5 Z98044.1-201ENST00000632503 1764 ntBASIC18.37■□□□□ 0.53
RNF11Q9Y3C5 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
RNF11Q9Y3C5 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF11Q9Y3C5 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF11Q9Y3C5 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
RNF11Q9Y3C5 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF11Q9Y3C5 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
RNF11Q9Y3C5 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF11Q9Y3C5 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF11Q9Y3C5 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF11Q9Y3C5 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.37■□□□□ 0.53
RNF11Q9Y3C5 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF11Q9Y3C5 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.37■□□□□ 0.53
RNF11Q9Y3C5 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF11Q9Y3C5 AC004980.1-204ENST00000429707 299 ntBASIC18.37■□□□□ 0.53
RNF11Q9Y3C5 AP002982.1-201ENST00000492365 877 ntBASIC18.37■□□□□ 0.53
RNF11Q9Y3C5 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.37■□□□□ 0.53
RNF11Q9Y3C5 AC131212.4-201ENST00000623606 975 ntBASIC18.37■□□□□ 0.53
RNF11Q9Y3C5 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF11Q9Y3C5 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF11Q9Y3C5 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.37■□□□□ 0.53
RNF11Q9Y3C5 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.37■□□□□ 0.53
RNF11Q9Y3C5 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.37■□□□□ 0.53
RNF11Q9Y3C5 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.37■□□□□ 0.53
RNF11Q9Y3C5 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF11Q9Y3C5 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF11Q9Y3C5 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF11Q9Y3C5 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF11Q9Y3C5 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.37■□□□□ 0.53
RNF11Q9Y3C5 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF11Q9Y3C5 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
RNF11Q9Y3C5 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF11Q9Y3C5 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF11Q9Y3C5 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF11Q9Y3C5 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
RNF11Q9Y3C5 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF11Q9Y3C5 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
RNF11Q9Y3C5 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RNF11Q9Y3C5 NOC2LP2-201ENST00000407594 1944 ntBASIC18.36■□□□□ 0.53
RNF11Q9Y3C5 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.36■□□□□ 0.53
RNF11Q9Y3C5 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.36■□□□□ 0.53
RNF11Q9Y3C5 TSPY20P-201ENST00000450910 630 ntBASIC18.36■□□□□ 0.53
RNF11Q9Y3C5 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.36■□□□□ 0.53
RNF11Q9Y3C5 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.36■□□□□ 0.53
RNF11Q9Y3C5 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
RNF11Q9Y3C5 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms