Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
UBE2D4Q9Y2X8 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
UBE2D4Q9Y2X8 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
UBE2D4Q9Y2X8 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
UBE2D4Q9Y2X8 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
UBE2D4Q9Y2X8 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
UBE2D4Q9Y2X8 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
UBE2D4Q9Y2X8 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC13.14□□□□□ -0.31
UBE2D4Q9Y2X8 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
UBE2D4Q9Y2X8 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC13.14□□□□□ -0.31
UBE2D4Q9Y2X8 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC13.14□□□□□ -0.31
UBE2D4Q9Y2X8 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
UBE2D4Q9Y2X8 DUSP5P2-201ENST00000426873 1033 ntBASIC13.14□□□□□ -0.31
UBE2D4Q9Y2X8 ABHD17AP6-201ENST00000458502 1044 ntBASIC13.14□□□□□ -0.31
UBE2D4Q9Y2X8 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC13.14□□□□□ -0.31
UBE2D4Q9Y2X8 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC13.14□□□□□ -0.31
UBE2D4Q9Y2X8 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC13.14□□□□□ -0.31
UBE2D4Q9Y2X8 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC13.14□□□□□ -0.31
UBE2D4Q9Y2X8 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
UBE2D4Q9Y2X8 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
UBE2D4Q9Y2X8 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
UBE2D4Q9Y2X8 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC13.14□□□□□ -0.31
UBE2D4Q9Y2X8 GAS2L1P1-201ENST00000420145 1480 ntBASIC13.14□□□□□ -0.31
UBE2D4Q9Y2X8 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
UBE2D4Q9Y2X8 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
UBE2D4Q9Y2X8 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
UBE2D4Q9Y2X8 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
UBE2D4Q9Y2X8 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
UBE2D4Q9Y2X8 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
UBE2D4Q9Y2X8 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
UBE2D4Q9Y2X8 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
UBE2D4Q9Y2X8 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC13.13□□□□□ -0.31
UBE2D4Q9Y2X8 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC13.13□□□□□ -0.31
UBE2D4Q9Y2X8 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
UBE2D4Q9Y2X8 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
UBE2D4Q9Y2X8 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
UBE2D4Q9Y2X8 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
UBE2D4Q9Y2X8 GATB-213ENST00000515812 1893 ntTSL 5 BASIC13.13□□□□□ -0.31
UBE2D4Q9Y2X8 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC13.13□□□□□ -0.31
UBE2D4Q9Y2X8 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC13.13□□□□□ -0.31
UBE2D4Q9Y2X8 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
UBE2D4Q9Y2X8 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
UBE2D4Q9Y2X8 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
UBE2D4Q9Y2X8 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
UBE2D4Q9Y2X8 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
UBE2D4Q9Y2X8 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
UBE2D4Q9Y2X8 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC13.13□□□□□ -0.31
UBE2D4Q9Y2X8 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC13.13□□□□□ -0.31
UBE2D4Q9Y2X8 AL050303.2-201ENST00000619798 666 ntBASIC13.13□□□□□ -0.31
UBE2D4Q9Y2X8 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC13.13□□□□□ -0.31
UBE2D4Q9Y2X8 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
UBE2D4Q9Y2X8 AC067852.2-201ENST00000590513 2313 ntBASIC13.13□□□□□ -0.31
UBE2D4Q9Y2X8 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
UBE2D4Q9Y2X8 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
UBE2D4Q9Y2X8 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
UBE2D4Q9Y2X8 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
UBE2D4Q9Y2X8 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
UBE2D4Q9Y2X8 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
UBE2D4Q9Y2X8 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC13.13□□□□□ -0.31
UBE2D4Q9Y2X8 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
UBE2D4Q9Y2X8 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC13.13□□□□□ -0.31
UBE2D4Q9Y2X8 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
UBE2D4Q9Y2X8 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
UBE2D4Q9Y2X8 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
UBE2D4Q9Y2X8 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
UBE2D4Q9Y2X8 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC13.12□□□□□ -0.31
UBE2D4Q9Y2X8 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC13.12□□□□□ -0.31
UBE2D4Q9Y2X8 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
UBE2D4Q9Y2X8 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
UBE2D4Q9Y2X8 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
UBE2D4Q9Y2X8 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
UBE2D4Q9Y2X8 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
UBE2D4Q9Y2X8 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC13.12□□□□□ -0.31
UBE2D4Q9Y2X8 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
UBE2D4Q9Y2X8 MIPEPP3-201ENST00000412105 444 ntBASIC13.12□□□□□ -0.31
UBE2D4Q9Y2X8 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC13.12□□□□□ -0.31
UBE2D4Q9Y2X8 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC13.12□□□□□ -0.31
UBE2D4Q9Y2X8 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
UBE2D4Q9Y2X8 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC13.12□□□□□ -0.31
UBE2D4Q9Y2X8 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
UBE2D4Q9Y2X8 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
UBE2D4Q9Y2X8 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC13.12□□□□□ -0.31
UBE2D4Q9Y2X8 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
UBE2D4Q9Y2X8 AL121829.2-201ENST00000620908 328 ntBASIC13.12□□□□□ -0.31
UBE2D4Q9Y2X8 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
UBE2D4Q9Y2X8 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
UBE2D4Q9Y2X8 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
UBE2D4Q9Y2X8 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC13.12□□□□□ -0.31
UBE2D4Q9Y2X8 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
UBE2D4Q9Y2X8 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
UBE2D4Q9Y2X8 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
UBE2D4Q9Y2X8 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC13.12□□□□□ -0.31
UBE2D4Q9Y2X8 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC13.12□□□□□ -0.31
UBE2D4Q9Y2X8 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
UBE2D4Q9Y2X8 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
UBE2D4Q9Y2X8 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
UBE2D4Q9Y2X8 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC13.12□□□□□ -0.31
UBE2D4Q9Y2X8 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
UBE2D4Q9Y2X8 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
UBE2D4Q9Y2X8 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms