Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
MACF1Q9UPN3 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
MACF1Q9UPN3 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC7.73□□□□□ -1.17
MACF1Q9UPN3 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC7.73□□□□□ -1.17
MACF1Q9UPN3 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
MACF1Q9UPN3 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC7.73□□□□□ -1.17
MACF1Q9UPN3 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
MACF1Q9UPN3 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
MACF1Q9UPN3 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
MACF1Q9UPN3 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
MACF1Q9UPN3 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC7.73□□□□□ -1.17
MACF1Q9UPN3 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC7.73□□□□□ -1.17
MACF1Q9UPN3 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC7.73□□□□□ -1.17
MACF1Q9UPN3 COQ6-210ENST00000554920 649 ntTSL 3 BASIC7.73□□□□□ -1.17
MACF1Q9UPN3 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
MACF1Q9UPN3 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
MACF1Q9UPN3 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
MACF1Q9UPN3 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC7.73□□□□□ -1.17
MACF1Q9UPN3 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC7.73□□□□□ -1.17
MACF1Q9UPN3 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC7.73□□□□□ -1.17
MACF1Q9UPN3 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC7.73□□□□□ -1.17
MACF1Q9UPN3 AP000867.4-201ENST00000641616 219 ntBASIC7.73□□□□□ -1.17
MACF1Q9UPN3 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC7.73□□□□□ -1.17
MACF1Q9UPN3 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
MACF1Q9UPN3 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC7.73□□□□□ -1.17
MACF1Q9UPN3 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
MACF1Q9UPN3 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC7.73□□□□□ -1.17
MACF1Q9UPN3 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC7.72□□□□□ -1.17
MACF1Q9UPN3 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
MACF1Q9UPN3 GRAMD4P1-201ENST00000435181 1110 ntBASIC7.72□□□□□ -1.17
MACF1Q9UPN3 RNA5SP423-201ENST00000517127 109 ntBASIC7.72□□□□□ -1.17
MACF1Q9UPN3 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC7.72□□□□□ -1.17
MACF1Q9UPN3 COQ9-214ENST00000567933 882 ntTSL 3 BASIC7.72□□□□□ -1.17
MACF1Q9UPN3 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC7.72□□□□□ -1.17
MACF1Q9UPN3 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
MACF1Q9UPN3 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC7.72□□□□□ -1.17
MACF1Q9UPN3 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
MACF1Q9UPN3 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
MACF1Q9UPN3 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC7.72□□□□□ -1.17
MACF1Q9UPN3 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
MACF1Q9UPN3 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
MACF1Q9UPN3 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC7.72□□□□□ -1.17
MACF1Q9UPN3 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
MACF1Q9UPN3 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC7.72□□□□□ -1.17
MACF1Q9UPN3 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC7.72□□□□□ -1.17
MACF1Q9UPN3 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC7.72□□□□□ -1.17
MACF1Q9UPN3 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
MACF1Q9UPN3 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
MACF1Q9UPN3 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC7.72□□□□□ -1.17
MACF1Q9UPN3 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
MACF1Q9UPN3 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC7.72□□□□□ -1.17
MACF1Q9UPN3 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC7.72□□□□□ -1.17
MACF1Q9UPN3 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC7.72□□□□□ -1.17
MACF1Q9UPN3 RAB17-203ENST00000409576 466 ntTSL 3 BASIC7.72□□□□□ -1.17
MACF1Q9UPN3 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
MACF1Q9UPN3 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
MACF1Q9UPN3 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC7.72□□□□□ -1.17
MACF1Q9UPN3 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC7.72□□□□□ -1.17
MACF1Q9UPN3 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC7.72□□□□□ -1.17
MACF1Q9UPN3 TP73-AS1-210ENST00000637775 1455 ntBASIC7.72□□□□□ -1.17
MACF1Q9UPN3 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
MACF1Q9UPN3 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
MACF1Q9UPN3 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
MACF1Q9UPN3 GUSBP12-201ENST00000513727 720 ntBASIC7.72□□□□□ -1.17
MACF1Q9UPN3 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC7.72□□□□□ -1.17
MACF1Q9UPN3 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC7.72□□□□□ -1.17
MACF1Q9UPN3 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
MACF1Q9UPN3 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
MACF1Q9UPN3 AL356309.3-201ENST00000624132 1934 ntBASIC7.72□□□□□ -1.17
MACF1Q9UPN3 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
MACF1Q9UPN3 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
MACF1Q9UPN3 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
MACF1Q9UPN3 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC7.72□□□□□ -1.17
MACF1Q9UPN3 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
MACF1Q9UPN3 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
MACF1Q9UPN3 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC7.72□□□□□ -1.17
MACF1Q9UPN3 FAM8A2P-201ENST00000528813 1142 ntBASIC7.72□□□□□ -1.17
MACF1Q9UPN3 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
MACF1Q9UPN3 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC7.72□□□□□ -1.17
MACF1Q9UPN3 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC7.72□□□□□ -1.17
MACF1Q9UPN3 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
MACF1Q9UPN3 PKM-204ENST00000449901 2526 ntTSL 2 BASIC7.72□□□□□ -1.17
MACF1Q9UPN3 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
MACF1Q9UPN3 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
MACF1Q9UPN3 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC7.72□□□□□ -1.17
MACF1Q9UPN3 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
MACF1Q9UPN3 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC7.72□□□□□ -1.17
MACF1Q9UPN3 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
MACF1Q9UPN3 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
MACF1Q9UPN3 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC7.72□□□□□ -1.17
MACF1Q9UPN3 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC7.71□□□□□ -1.17
MACF1Q9UPN3 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC7.71□□□□□ -1.17
MACF1Q9UPN3 KRT8P3-201ENST00000519669 1449 ntBASIC7.71□□□□□ -1.17
MACF1Q9UPN3 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC7.71□□□□□ -1.17
MACF1Q9UPN3 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
MACF1Q9UPN3 RPS29-206ENST00000557111 488 ntTSL 2 BASIC7.71□□□□□ -1.17
MACF1Q9UPN3 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC7.71□□□□□ -1.17
MACF1Q9UPN3 ERF-202ENST00000440177 2032 ntTSL 2 BASIC7.71□□□□□ -1.17
MACF1Q9UPN3 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.17
MACF1Q9UPN3 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms