Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 AC079598.2-202ENST00000546624 1451 ntBASIC19.58■□□□□ 0.72
AP4E1Q9UPM8 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
AP4E1Q9UPM8 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
AP4E1Q9UPM8 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
AP4E1Q9UPM8 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
AP4E1Q9UPM8 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
AP4E1Q9UPM8 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
AP4E1Q9UPM8 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
AP4E1Q9UPM8 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.57■□□□□ 0.72
AP4E1Q9UPM8 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
AP4E1Q9UPM8 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
AP4E1Q9UPM8 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
AP4E1Q9UPM8 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
AP4E1Q9UPM8 HEIH-201ENST00000623091 1652 ntBASIC19.57■□□□□ 0.72
AP4E1Q9UPM8 KRT8P32-201ENST00000512863 1461 ntBASIC19.57■□□□□ 0.72
AP4E1Q9UPM8 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
AP4E1Q9UPM8 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
AP4E1Q9UPM8 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
AP4E1Q9UPM8 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
AP4E1Q9UPM8 AP000525.1-201ENST00000608286 694 ntBASIC19.57■□□□□ 0.72
AP4E1Q9UPM8 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
AP4E1Q9UPM8 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
AP4E1Q9UPM8 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
AP4E1Q9UPM8 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
AP4E1Q9UPM8 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
AP4E1Q9UPM8 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
AP4E1Q9UPM8 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
AP4E1Q9UPM8 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
AP4E1Q9UPM8 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
AP4E1Q9UPM8 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
AP4E1Q9UPM8 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
AP4E1Q9UPM8 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.56■□□□□ 0.72
AP4E1Q9UPM8 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
AP4E1Q9UPM8 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
AP4E1Q9UPM8 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
AP4E1Q9UPM8 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.56■□□□□ 0.72
AP4E1Q9UPM8 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
AP4E1Q9UPM8 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.56■□□□□ 0.72
AP4E1Q9UPM8 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.56■□□□□ 0.72
AP4E1Q9UPM8 AC068587.9-201ENST00000641814 219 ntBASIC19.56■□□□□ 0.72
AP4E1Q9UPM8 Z98044.1-201ENST00000632503 1764 ntBASIC19.56■□□□□ 0.72
AP4E1Q9UPM8 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
AP4E1Q9UPM8 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.56■□□□□ 0.72
AP4E1Q9UPM8 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.56■□□□□ 0.72
AP4E1Q9UPM8 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.56■□□□□ 0.72
AP4E1Q9UPM8 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
AP4E1Q9UPM8 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
AP4E1Q9UPM8 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
AP4E1Q9UPM8 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
AP4E1Q9UPM8 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
AP4E1Q9UPM8 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
AP4E1Q9UPM8 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.55■□□□□ 0.72
AP4E1Q9UPM8 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
AP4E1Q9UPM8 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
AP4E1Q9UPM8 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.55■□□□□ 0.72
AP4E1Q9UPM8 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.55■□□□□ 0.72
AP4E1Q9UPM8 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
AP4E1Q9UPM8 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
AP4E1Q9UPM8 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
AP4E1Q9UPM8 AL390955.1-201ENST00000428694 934 ntBASIC19.55■□□□□ 0.72
AP4E1Q9UPM8 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.55■□□□□ 0.72
AP4E1Q9UPM8 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.55■□□□□ 0.72
AP4E1Q9UPM8 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
AP4E1Q9UPM8 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
AP4E1Q9UPM8 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
AP4E1Q9UPM8 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
AP4E1Q9UPM8 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.55■□□□□ 0.72
AP4E1Q9UPM8 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
AP4E1Q9UPM8 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.55■□□□□ 0.72
AP4E1Q9UPM8 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.55■□□□□ 0.72
AP4E1Q9UPM8 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.55■□□□□ 0.72
AP4E1Q9UPM8 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
AP4E1Q9UPM8 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.55■□□□□ 0.72
AP4E1Q9UPM8 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
AP4E1Q9UPM8 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
AP4E1Q9UPM8 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
AP4E1Q9UPM8 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
AP4E1Q9UPM8 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.54■□□□□ 0.72
AP4E1Q9UPM8 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
AP4E1Q9UPM8 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
AP4E1Q9UPM8 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
AP4E1Q9UPM8 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.54■□□□□ 0.72
AP4E1Q9UPM8 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
AP4E1Q9UPM8 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
AP4E1Q9UPM8 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
AP4E1Q9UPM8 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.54■□□□□ 0.72
AP4E1Q9UPM8 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
AP4E1Q9UPM8 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
AP4E1Q9UPM8 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
AP4E1Q9UPM8 AL138781.2-201ENST00000617896 1843 ntBASIC19.54■□□□□ 0.72
AP4E1Q9UPM8 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.54■□□□□ 0.72
AP4E1Q9UPM8 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
AP4E1Q9UPM8 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
AP4E1Q9UPM8 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
AP4E1Q9UPM8 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.54■□□□□ 0.72
AP4E1Q9UPM8 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
AP4E1Q9UPM8 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
AP4E1Q9UPM8 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
AP4E1Q9UPM8 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
AP4E1Q9UPM8 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms