Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
PPARGC1AQ9UBK2 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PPARGC1AQ9UBK2 MIR1238-201ENST00000408483 83 ntBASIC19.64■□□□□ 0.73
PPARGC1AQ9UBK2 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PPARGC1AQ9UBK2 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.64■□□□□ 0.73
PPARGC1AQ9UBK2 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PPARGC1AQ9UBK2 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.64■□□□□ 0.73
PPARGC1AQ9UBK2 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.64■□□□□ 0.73
PPARGC1AQ9UBK2 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PPARGC1AQ9UBK2 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.64■□□□□ 0.73
PPARGC1AQ9UBK2 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.64■□□□□ 0.73
PPARGC1AQ9UBK2 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PPARGC1AQ9UBK2 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.64■□□□□ 0.73
PPARGC1AQ9UBK2 FEM1AP3-201ENST00000403722 1741 ntBASIC19.64■□□□□ 0.73
PPARGC1AQ9UBK2 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.64■□□□□ 0.73
PPARGC1AQ9UBK2 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.64■□□□□ 0.73
PPARGC1AQ9UBK2 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PPARGC1AQ9UBK2 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PPARGC1AQ9UBK2 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.64■□□□□ 0.73
PPARGC1AQ9UBK2 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PPARGC1AQ9UBK2 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
PPARGC1AQ9UBK2 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PPARGC1AQ9UBK2 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
PPARGC1AQ9UBK2 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
PPARGC1AQ9UBK2 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.63■□□□□ 0.73
PPARGC1AQ9UBK2 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PPARGC1AQ9UBK2 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PPARGC1AQ9UBK2 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.63■□□□□ 0.73
PPARGC1AQ9UBK2 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PPARGC1AQ9UBK2 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
PPARGC1AQ9UBK2 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
PPARGC1AQ9UBK2 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PPARGC1AQ9UBK2 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PPARGC1AQ9UBK2 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PPARGC1AQ9UBK2 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PPARGC1AQ9UBK2 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PPARGC1AQ9UBK2 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.63■□□□□ 0.73
PPARGC1AQ9UBK2 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PPARGC1AQ9UBK2 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PPARGC1AQ9UBK2 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
PPARGC1AQ9UBK2 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.63■□□□□ 0.73
PPARGC1AQ9UBK2 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PPARGC1AQ9UBK2 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PPARGC1AQ9UBK2 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
PPARGC1AQ9UBK2 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.63■□□□□ 0.73
PPARGC1AQ9UBK2 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
PPARGC1AQ9UBK2 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PPARGC1AQ9UBK2 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
PPARGC1AQ9UBK2 IRX1P1-201ENST00000438849 1838 ntBASIC19.62■□□□□ 0.73
PPARGC1AQ9UBK2 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.62■□□□□ 0.73
PPARGC1AQ9UBK2 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PPARGC1AQ9UBK2 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.62■□□□□ 0.73
PPARGC1AQ9UBK2 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PPARGC1AQ9UBK2 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PPARGC1AQ9UBK2 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PPARGC1AQ9UBK2 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PPARGC1AQ9UBK2 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.62■□□□□ 0.73
PPARGC1AQ9UBK2 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.62■□□□□ 0.73
PPARGC1AQ9UBK2 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PPARGC1AQ9UBK2 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PPARGC1AQ9UBK2 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.62■□□□□ 0.73
PPARGC1AQ9UBK2 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.62■□□□□ 0.73
PPARGC1AQ9UBK2 FP475955.4-201ENST00000623131 1990 ntBASIC19.62■□□□□ 0.73
PPARGC1AQ9UBK2 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.62■□□□□ 0.73
PPARGC1AQ9UBK2 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PPARGC1AQ9UBK2 NEFHP1-201ENST00000412845 2629 ntBASIC19.62■□□□□ 0.73
PPARGC1AQ9UBK2 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PPARGC1AQ9UBK2 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
PPARGC1AQ9UBK2 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.62■□□□□ 0.73
PPARGC1AQ9UBK2 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PPARGC1AQ9UBK2 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.62■□□□□ 0.73
PPARGC1AQ9UBK2 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
PPARGC1AQ9UBK2 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.62■□□□□ 0.73
PPARGC1AQ9UBK2 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.62■□□□□ 0.73
PPARGC1AQ9UBK2 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.62■□□□□ 0.73
PPARGC1AQ9UBK2 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.62■□□□□ 0.73
PPARGC1AQ9UBK2 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PPARGC1AQ9UBK2 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PPARGC1AQ9UBK2 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PPARGC1AQ9UBK2 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PPARGC1AQ9UBK2 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.61■□□□□ 0.73
PPARGC1AQ9UBK2 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PPARGC1AQ9UBK2 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PPARGC1AQ9UBK2 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PPARGC1AQ9UBK2 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.61■□□□□ 0.73
PPARGC1AQ9UBK2 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.61■□□□□ 0.73
PPARGC1AQ9UBK2 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.61■□□□□ 0.73
PPARGC1AQ9UBK2 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.61■□□□□ 0.73
PPARGC1AQ9UBK2 AL390955.1-201ENST00000428694 934 ntBASIC19.61■□□□□ 0.73
PPARGC1AQ9UBK2 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PPARGC1AQ9UBK2 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.61■□□□□ 0.73
PPARGC1AQ9UBK2 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.61■□□□□ 0.73
PPARGC1AQ9UBK2 CA15P1-201ENST00000481698 905 ntBASIC19.61■□□□□ 0.73
PPARGC1AQ9UBK2 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.61■□□□□ 0.73
PPARGC1AQ9UBK2 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.61■□□□□ 0.73
PPARGC1AQ9UBK2 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.61■□□□□ 0.73
PPARGC1AQ9UBK2 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.61■□□□□ 0.73
PPARGC1AQ9UBK2 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PPARGC1AQ9UBK2 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PPARGC1AQ9UBK2 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms