Protein–RNA interactions for Protein: Q9NYL5

CYP39A1, 24-hydroxycholesterol 7-alpha-hydroxylase, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP39A1Q9NYL5 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CYP39A1Q9NYL5 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CYP39A1Q9NYL5 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CYP39A1Q9NYL5 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
CYP39A1Q9NYL5 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
CYP39A1Q9NYL5 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC21.39■■□□□ 1.01
CYP39A1Q9NYL5 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
CYP39A1Q9NYL5 KRT126P-201ENST00000549467 1181 ntBASIC21.39■■□□□ 1.01
CYP39A1Q9NYL5 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
CYP39A1Q9NYL5 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC21.39■■□□□ 1.01
CYP39A1Q9NYL5 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CYP39A1Q9NYL5 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CYP39A1Q9NYL5 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
CYP39A1Q9NYL5 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CYP39A1Q9NYL5 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
CYP39A1Q9NYL5 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CYP39A1Q9NYL5 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
CYP39A1Q9NYL5 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
CYP39A1Q9NYL5 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC21.39■■□□□ 1.01
CYP39A1Q9NYL5 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CYP39A1Q9NYL5 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
CYP39A1Q9NYL5 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CYP39A1Q9NYL5 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CYP39A1Q9NYL5 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC21.38■■□□□ 1.01
CYP39A1Q9NYL5 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CYP39A1Q9NYL5 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC21.38■■□□□ 1.01
CYP39A1Q9NYL5 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC21.38■■□□□ 1.01
CYP39A1Q9NYL5 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC21.38■■□□□ 1.01
CYP39A1Q9NYL5 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
CYP39A1Q9NYL5 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CYP39A1Q9NYL5 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CYP39A1Q9NYL5 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CYP39A1Q9NYL5 ATP5G2P1-201ENST00000433580 426 ntBASIC21.38■■□□□ 1.01
CYP39A1Q9NYL5 DUSP5P1-201ENST00000441325 1139 ntBASIC21.38■■□□□ 1.01
CYP39A1Q9NYL5 MIR3917-201ENST00000580971 93 ntBASIC21.38■■□□□ 1.01
CYP39A1Q9NYL5 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC21.38■■□□□ 1.01
CYP39A1Q9NYL5 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
CYP39A1Q9NYL5 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CYP39A1Q9NYL5 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CYP39A1Q9NYL5 AC141586.3-201ENST00000562166 1838 ntBASIC21.38■■□□□ 1.01
CYP39A1Q9NYL5 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC21.38■■□□□ 1.01
CYP39A1Q9NYL5 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CYP39A1Q9NYL5 KRT8P32-201ENST00000512863 1461 ntBASIC21.38■■□□□ 1.01
CYP39A1Q9NYL5 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CYP39A1Q9NYL5 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC21.38■■□□□ 1.01
CYP39A1Q9NYL5 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.37■■□□□ 1.01
CYP39A1Q9NYL5 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC21.37■■□□□ 1.01
CYP39A1Q9NYL5 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CYP39A1Q9NYL5 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC21.37■■□□□ 1.01
CYP39A1Q9NYL5 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
CYP39A1Q9NYL5 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CYP39A1Q9NYL5 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CYP39A1Q9NYL5 ENSA-205ENST00000361532 792 ntTSL 2 BASIC21.37■■□□□ 1.01
CYP39A1Q9NYL5 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC21.37■■□□□ 1.01
CYP39A1Q9NYL5 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CYP39A1Q9NYL5 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC21.37■■□□□ 1.01
CYP39A1Q9NYL5 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CYP39A1Q9NYL5 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC21.37■■□□□ 1.01
CYP39A1Q9NYL5 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC21.37■■□□□ 1.01
CYP39A1Q9NYL5 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC21.37■■□□□ 1.01
CYP39A1Q9NYL5 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CYP39A1Q9NYL5 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC21.37■■□□□ 1.01
CYP39A1Q9NYL5 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CYP39A1Q9NYL5 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.37■■□□□ 1.01
CYP39A1Q9NYL5 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CYP39A1Q9NYL5 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.37■■□□□ 1.01
CYP39A1Q9NYL5 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC21.37■■□□□ 1.01
CYP39A1Q9NYL5 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC21.36■■□□□ 1.01
CYP39A1Q9NYL5 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CYP39A1Q9NYL5 FP475955.4-201ENST00000623131 1990 ntBASIC21.36■■□□□ 1.01
CYP39A1Q9NYL5 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC21.36■■□□□ 1.01
CYP39A1Q9NYL5 IPPK-202ENST00000375522 882 ntTSL 3 BASIC21.36■■□□□ 1.01
CYP39A1Q9NYL5 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CYP39A1Q9NYL5 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CYP39A1Q9NYL5 HLA-F-220ENST00000434407 884 ntBASIC21.36■■□□□ 1.01
CYP39A1Q9NYL5 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC21.36■■□□□ 1.01
CYP39A1Q9NYL5 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CYP39A1Q9NYL5 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC21.36■■□□□ 1.01
CYP39A1Q9NYL5 NPAP1P7-201ENST00000613027 823 ntBASIC21.36■■□□□ 1.01
CYP39A1Q9NYL5 BCL10-202ENST00000620248 774 ntTSL 5 BASIC21.36■■□□□ 1.01
CYP39A1Q9NYL5 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.36■■□□□ 1.01
CYP39A1Q9NYL5 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CYP39A1Q9NYL5 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CYP39A1Q9NYL5 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
CYP39A1Q9NYL5 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CYP39A1Q9NYL5 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CYP39A1Q9NYL5 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
CYP39A1Q9NYL5 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CYP39A1Q9NYL5 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.35■■□□□ 1.01
CYP39A1Q9NYL5 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CYP39A1Q9NYL5 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CYP39A1Q9NYL5 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC21.35■■□□□ 1.01
CYP39A1Q9NYL5 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
CYP39A1Q9NYL5 MIR564-202ENST00000385049 94 ntBASIC21.35■■□□□ 1.01
CYP39A1Q9NYL5 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC21.35■■□□□ 1.01
CYP39A1Q9NYL5 KRT18P23-201ENST00000435622 1283 ntBASIC21.35■■□□□ 1.01
CYP39A1Q9NYL5 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
CYP39A1Q9NYL5 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC21.35■■□□□ 1.01
CYP39A1Q9NYL5 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC21.35■■□□□ 1.01
CYP39A1Q9NYL5 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC21.35■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms