Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CUEDC1Q9NWM3 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.24■□□□□ 0.51
CUEDC1Q9NWM3 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.24■□□□□ 0.51
CUEDC1Q9NWM3 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.24■□□□□ 0.51
CUEDC1Q9NWM3 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.24■□□□□ 0.51
CUEDC1Q9NWM3 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CUEDC1Q9NWM3 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CUEDC1Q9NWM3 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
CUEDC1Q9NWM3 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CUEDC1Q9NWM3 CYP2D8P-201ENST00000433633 1490 ntBASIC18.24■□□□□ 0.51
CUEDC1Q9NWM3 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.24■□□□□ 0.51
CUEDC1Q9NWM3 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CUEDC1Q9NWM3 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CUEDC1Q9NWM3 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CUEDC1Q9NWM3 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CUEDC1Q9NWM3 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CUEDC1Q9NWM3 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CUEDC1Q9NWM3 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
CUEDC1Q9NWM3 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CUEDC1Q9NWM3 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CUEDC1Q9NWM3 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CUEDC1Q9NWM3 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CUEDC1Q9NWM3 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CUEDC1Q9NWM3 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CUEDC1Q9NWM3 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CUEDC1Q9NWM3 AC018445.3-201ENST00000624177 1945 ntBASIC18.23■□□□□ 0.51
CUEDC1Q9NWM3 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CUEDC1Q9NWM3 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CUEDC1Q9NWM3 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.23■□□□□ 0.51
CUEDC1Q9NWM3 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.23■□□□□ 0.51
CUEDC1Q9NWM3 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CUEDC1Q9NWM3 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.23■□□□□ 0.51
CUEDC1Q9NWM3 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC18.23■□□□□ 0.51
CUEDC1Q9NWM3 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.23■□□□□ 0.51
CUEDC1Q9NWM3 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.23■□□□□ 0.51
CUEDC1Q9NWM3 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.23■□□□□ 0.51
CUEDC1Q9NWM3 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.23■□□□□ 0.51
CUEDC1Q9NWM3 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
CUEDC1Q9NWM3 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.23■□□□□ 0.51
CUEDC1Q9NWM3 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.23■□□□□ 0.51
CUEDC1Q9NWM3 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CUEDC1Q9NWM3 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CUEDC1Q9NWM3 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.23■□□□□ 0.51
CUEDC1Q9NWM3 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.23■□□□□ 0.51
CUEDC1Q9NWM3 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CUEDC1Q9NWM3 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
CUEDC1Q9NWM3 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.22■□□□□ 0.51
CUEDC1Q9NWM3 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
CUEDC1Q9NWM3 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.22■□□□□ 0.51
CUEDC1Q9NWM3 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CUEDC1Q9NWM3 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CUEDC1Q9NWM3 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CUEDC1Q9NWM3 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CUEDC1Q9NWM3 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CUEDC1Q9NWM3 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CUEDC1Q9NWM3 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CUEDC1Q9NWM3 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CUEDC1Q9NWM3 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.22■□□□□ 0.51
CUEDC1Q9NWM3 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.22■□□□□ 0.51
CUEDC1Q9NWM3 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.22■□□□□ 0.51
CUEDC1Q9NWM3 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.22■□□□□ 0.51
CUEDC1Q9NWM3 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.22■□□□□ 0.51
CUEDC1Q9NWM3 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.22■□□□□ 0.51
CUEDC1Q9NWM3 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CUEDC1Q9NWM3 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CUEDC1Q9NWM3 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CUEDC1Q9NWM3 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.22■□□□□ 0.51
CUEDC1Q9NWM3 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.22■□□□□ 0.51
CUEDC1Q9NWM3 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CUEDC1Q9NWM3 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.22■□□□□ 0.51
CUEDC1Q9NWM3 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.22■□□□□ 0.51
CUEDC1Q9NWM3 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CUEDC1Q9NWM3 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CUEDC1Q9NWM3 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.21■□□□□ 0.51
CUEDC1Q9NWM3 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.21■□□□□ 0.51
CUEDC1Q9NWM3 AC006333.2-201ENST00000607957 2099 ntBASIC18.21■□□□□ 0.51
CUEDC1Q9NWM3 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CUEDC1Q9NWM3 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CUEDC1Q9NWM3 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CUEDC1Q9NWM3 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.21■□□□□ 0.51
CUEDC1Q9NWM3 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.21■□□□□ 0.51
CUEDC1Q9NWM3 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CUEDC1Q9NWM3 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CUEDC1Q9NWM3 AC010947.1-201ENST00000623454 693 ntBASIC18.21■□□□□ 0.51
CUEDC1Q9NWM3 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CUEDC1Q9NWM3 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CUEDC1Q9NWM3 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CUEDC1Q9NWM3 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CUEDC1Q9NWM3 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
CUEDC1Q9NWM3 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CUEDC1Q9NWM3 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.21■□□□□ 0.51
CUEDC1Q9NWM3 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CUEDC1Q9NWM3 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.21■□□□□ 0.51
CUEDC1Q9NWM3 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CUEDC1Q9NWM3 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CUEDC1Q9NWM3 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CUEDC1Q9NWM3 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.5
CUEDC1Q9NWM3 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
CUEDC1Q9NWM3 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.21■□□□□ 0.5
CUEDC1Q9NWM3 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms