Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.82■□□□□ 0.6
TREX1Q9NSU2 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TREX1Q9NSU2 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TREX1Q9NSU2 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
TREX1Q9NSU2 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
TREX1Q9NSU2 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.82■□□□□ 0.6
TREX1Q9NSU2 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.82■□□□□ 0.6
TREX1Q9NSU2 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TREX1Q9NSU2 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TREX1Q9NSU2 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.82■□□□□ 0.6
TREX1Q9NSU2 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TREX1Q9NSU2 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TREX1Q9NSU2 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TREX1Q9NSU2 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.81■□□□□ 0.6
TREX1Q9NSU2 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.81■□□□□ 0.6
TREX1Q9NSU2 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.81■□□□□ 0.6
TREX1Q9NSU2 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TREX1Q9NSU2 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TREX1Q9NSU2 RCC2P3-201ENST00000418112 1537 ntBASIC18.81■□□□□ 0.6
TREX1Q9NSU2 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.81■□□□□ 0.6
TREX1Q9NSU2 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
TREX1Q9NSU2 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.81■□□□□ 0.6
TREX1Q9NSU2 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.81■□□□□ 0.6
TREX1Q9NSU2 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.81■□□□□ 0.6
TREX1Q9NSU2 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.81■□□□□ 0.6
TREX1Q9NSU2 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.81■□□□□ 0.6
TREX1Q9NSU2 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.81■□□□□ 0.6
TREX1Q9NSU2 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TREX1Q9NSU2 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
TREX1Q9NSU2 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.81■□□□□ 0.6
TREX1Q9NSU2 AC008622.2-201ENST00000617006 1229 ntBASIC18.81■□□□□ 0.6
TREX1Q9NSU2 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.81■□□□□ 0.6
TREX1Q9NSU2 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TREX1Q9NSU2 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TREX1Q9NSU2 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TREX1Q9NSU2 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TREX1Q9NSU2 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.81■□□□□ 0.6
TREX1Q9NSU2 AL357033.4-201ENST00000617703 1807 ntBASIC18.81■□□□□ 0.6
TREX1Q9NSU2 AC073592.3-201ENST00000625118 1834 ntBASIC18.81■□□□□ 0.6
TREX1Q9NSU2 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.81■□□□□ 0.6
TREX1Q9NSU2 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TREX1Q9NSU2 AL499627.1-201ENST00000569373 2188 ntBASIC18.81■□□□□ 0.6
TREX1Q9NSU2 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TREX1Q9NSU2 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TREX1Q9NSU2 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.8■□□□□ 0.6
TREX1Q9NSU2 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.8■□□□□ 0.6
TREX1Q9NSU2 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
TREX1Q9NSU2 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TREX1Q9NSU2 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TREX1Q9NSU2 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
TREX1Q9NSU2 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.8■□□□□ 0.6
TREX1Q9NSU2 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
TREX1Q9NSU2 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TREX1Q9NSU2 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.8■□□□□ 0.6
TREX1Q9NSU2 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TREX1Q9NSU2 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.8■□□□□ 0.6
TREX1Q9NSU2 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TREX1Q9NSU2 MFAP1P1-201ENST00000442257 1255 ntBASIC18.8■□□□□ 0.6
TREX1Q9NSU2 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.8■□□□□ 0.6
TREX1Q9NSU2 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.8■□□□□ 0.6
TREX1Q9NSU2 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TREX1Q9NSU2 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.8■□□□□ 0.6
TREX1Q9NSU2 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TREX1Q9NSU2 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TREX1Q9NSU2 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
TREX1Q9NSU2 AC126763.1-201ENST00000552015 2118 ntBASIC18.8■□□□□ 0.6
TREX1Q9NSU2 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TREX1Q9NSU2 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TREX1Q9NSU2 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
TREX1Q9NSU2 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
TREX1Q9NSU2 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TREX1Q9NSU2 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TREX1Q9NSU2 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TREX1Q9NSU2 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TREX1Q9NSU2 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.79■□□□□ 0.6
TREX1Q9NSU2 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TREX1Q9NSU2 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.79■□□□□ 0.6
TREX1Q9NSU2 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TREX1Q9NSU2 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TREX1Q9NSU2 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TREX1Q9NSU2 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TREX1Q9NSU2 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.79■□□□□ 0.6
TREX1Q9NSU2 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.79■□□□□ 0.6
TREX1Q9NSU2 SLC25A1P4-201ENST00000567977 778 ntBASIC18.79■□□□□ 0.6
TREX1Q9NSU2 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.79■□□□□ 0.6
TREX1Q9NSU2 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.79■□□□□ 0.6
TREX1Q9NSU2 AC026471.5-201ENST00000615068 467 ntBASIC18.79■□□□□ 0.6
TREX1Q9NSU2 TMEM191A-211ENST00000637163 1067 ntBASIC18.79■□□□□ 0.6
TREX1Q9NSU2 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TREX1Q9NSU2 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.79■□□□□ 0.6
TREX1Q9NSU2 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TREX1Q9NSU2 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TREX1Q9NSU2 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
TREX1Q9NSU2 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
TREX1Q9NSU2 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TREX1Q9NSU2 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
TREX1Q9NSU2 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TREX1Q9NSU2 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TREX1Q9NSU2 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
TREX1Q9NSU2 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms