Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
VTA1Q9NP79 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
VTA1Q9NP79 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC21.09■□□□□ 0.97
VTA1Q9NP79 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.09■□□□□ 0.97
VTA1Q9NP79 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
VTA1Q9NP79 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
VTA1Q9NP79 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC21.09■□□□□ 0.97
VTA1Q9NP79 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
VTA1Q9NP79 UBQLN4P1-201ENST00000461599 1801 ntBASIC21.09■□□□□ 0.97
VTA1Q9NP79 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
VTA1Q9NP79 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
VTA1Q9NP79 SDHD-206ENST00000528182 754 ntTSL 3 BASIC21.09■□□□□ 0.97
VTA1Q9NP79 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC21.09■□□□□ 0.97
VTA1Q9NP79 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC21.09■□□□□ 0.97
VTA1Q9NP79 AP002414.4-201ENST00000589764 1148 ntBASIC21.09■□□□□ 0.97
VTA1Q9NP79 IRF5-214ENST00000613821 595 ntTSL 5 BASIC21.09■□□□□ 0.97
VTA1Q9NP79 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC21.09■□□□□ 0.97
VTA1Q9NP79 VPS72-207ENST00000640458 689 ntTSL 5 BASIC21.09■□□□□ 0.97
VTA1Q9NP79 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC21.09■□□□□ 0.97
VTA1Q9NP79 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC21.09■□□□□ 0.97
VTA1Q9NP79 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.09■□□□□ 0.97
VTA1Q9NP79 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
VTA1Q9NP79 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
VTA1Q9NP79 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
VTA1Q9NP79 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
VTA1Q9NP79 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC21.08■□□□□ 0.97
VTA1Q9NP79 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
VTA1Q9NP79 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
VTA1Q9NP79 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
VTA1Q9NP79 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.08■□□□□ 0.97
VTA1Q9NP79 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
VTA1Q9NP79 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
VTA1Q9NP79 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
VTA1Q9NP79 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
VTA1Q9NP79 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC21.08■□□□□ 0.97
VTA1Q9NP79 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC21.08■□□□□ 0.97
VTA1Q9NP79 TSPY22P-201ENST00000427496 604 ntBASIC21.08■□□□□ 0.97
VTA1Q9NP79 SKP2-204ENST00000508514 821 ntTSL 3 BASIC21.08■□□□□ 0.97
VTA1Q9NP79 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC21.08■□□□□ 0.97
VTA1Q9NP79 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
VTA1Q9NP79 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
VTA1Q9NP79 IRX1P1-201ENST00000438849 1838 ntBASIC21.08■□□□□ 0.96
VTA1Q9NP79 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
VTA1Q9NP79 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.96
VTA1Q9NP79 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC21.08■□□□□ 0.96
VTA1Q9NP79 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21.08■□□□□ 0.96
VTA1Q9NP79 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC21.07■□□□□ 0.96
VTA1Q9NP79 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
VTA1Q9NP79 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC21.07■□□□□ 0.96
VTA1Q9NP79 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
VTA1Q9NP79 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
VTA1Q9NP79 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
VTA1Q9NP79 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
VTA1Q9NP79 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
VTA1Q9NP79 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
VTA1Q9NP79 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC21.07■□□□□ 0.96
VTA1Q9NP79 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
VTA1Q9NP79 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
VTA1Q9NP79 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
VTA1Q9NP79 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
VTA1Q9NP79 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
VTA1Q9NP79 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
VTA1Q9NP79 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
VTA1Q9NP79 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
VTA1Q9NP79 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
VTA1Q9NP79 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
VTA1Q9NP79 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
VTA1Q9NP79 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC21.06■□□□□ 0.96
VTA1Q9NP79 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC21.06■□□□□ 0.96
VTA1Q9NP79 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC21.06■□□□□ 0.96
VTA1Q9NP79 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
VTA1Q9NP79 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
VTA1Q9NP79 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
VTA1Q9NP79 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
VTA1Q9NP79 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
VTA1Q9NP79 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
VTA1Q9NP79 PPIH-202ENST00000372549 327 ntTSL 3 BASIC21.06■□□□□ 0.96
VTA1Q9NP79 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
VTA1Q9NP79 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC21.06■□□□□ 0.96
VTA1Q9NP79 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC21.06■□□□□ 0.96
VTA1Q9NP79 RNF126P1-202ENST00000569893 925 ntBASIC21.06■□□□□ 0.96
VTA1Q9NP79 MIR3180-4-201ENST00000582223 153 ntBASIC21.06■□□□□ 0.96
VTA1Q9NP79 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
VTA1Q9NP79 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
VTA1Q9NP79 LITAF-220ENST00000620789 692 ntTSL 5 BASIC21.06■□□□□ 0.96
VTA1Q9NP79 AC034236.2-201ENST00000606662 1610 ntBASIC21.06■□□□□ 0.96
VTA1Q9NP79 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
VTA1Q9NP79 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
VTA1Q9NP79 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
VTA1Q9NP79 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
VTA1Q9NP79 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC21.06■□□□□ 0.96
VTA1Q9NP79 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
VTA1Q9NP79 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
VTA1Q9NP79 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
VTA1Q9NP79 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
VTA1Q9NP79 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
VTA1Q9NP79 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
VTA1Q9NP79 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
VTA1Q9NP79 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
VTA1Q9NP79 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms